21.0.0rc2

First official release after migrating the repository into the *NiPreps*' organization.
This release updates the Docker image with up-to-date dependencies, updates
*MRIQC*'s codebase to the latest *NiTransforms* and includes some minor bugfixes.
Finally, this release also contains a major code style overhaul by Zvi Baratz.
With thanks to @ZviBaratz, @nbeliy, @octomike, @benkay86, @verdurin, and @utooley for their contributions.

  * FIX: ``template_resolution`` deprecation warning (nipreps#941)
  * FIX: Set entity ``datatype`` in ``BIDSLayout`` queries (nipreps#942)
  * FIX: T2w image of MNI template unavailable in Singularity (nipreps#940)
  * FIX: Release process -- Docker deployment not working + Python package lacks WebAPI token (nipreps#938)
  * FIX: Revise building documentation at RTD after migration (nipreps#935)
  * FIX: Final touch-ups in the maintenance of Docker image + CI (nipreps#928)
  * FIX: Update unit tests (nipreps#927)
  * FIX: Update dependencies and repair BOLD workflow accordingly (nipreps#926)
  * FIX: Update dependencies and repair T1w workflow accordingly (nipreps#925)
  * FIX: Set ``matplotlib`` on ``Agg`` output mode (nipreps#892)
  * ENH: Optimize *PyBIDS*' layout initialization (nipreps#939)
  * ENH: Refactored long strings to a :mod:`mriqc.messages` module (nipreps#901)
  * ENH: Refactored :mod:`mriqc.interfaces.common` module (nipreps#901)
  * DOC: Various fixes to "Running mriqc" section (nipreps#897)
  * MAINT: Updates to ``CONTRIBUTORS.md`` file
  * MAINT: Revise Docker image settings & CircleCI (nipreps#937)
  * MAINT: Finalize transfer to ``nipreps`` organization (nipreps#936)
  * MAINT: Relicensing to Apache-2.0, for compliance with *NiPreps* and prior transfer to the org (nipreps#930)
  * MAINT: New Docker layer caching system of other *NiPreps* (nipreps#929)
  * MAINT: Code style overhaul (nipreps#901)
  * MAINT: Update ``Dockerfile`` and catch-up with *fMRIPrep*'s (nipreps#924)
  * STY: Run ``black`` at the top of the repo (nipreps#932)

21.0.0rc1

First official release after migrating the repository into the *NiPreps*' organization.
This release updates the Docker image with up-to-date dependencies, updates *MRIQC*'s codebase to the latest *NiTransforms* and includes some minor bugfixes.
Finally, this release also contains a major code style overhaul by Zvi Baratz (@ZviBaratz).
With thanks to Zvi Baratz, Nikita Beliy, Michael (@octomike), Benjamin
Kay, Adam Huffman, and Ursula Tooley for their contributions.

  * FIX: Release process -- Docker deployment not working + Python package lacks WebAPI token (nipreps#938)
  * FIX: Revise building documentation at RTD after migration (nipreps#935)
  * FIX: Final touch-ups in the maintenance of Docker image + CI (nipreps#928)
  * FIX: Update unit tests (nipreps#927)
  * FIX: Update dependencies and repair BOLD workflow accordingly (nipreps#926)
  * FIX: Update dependencies and repair T1w workflow accordingly (nipreps#925)
  * FIX: Set ``matplotlib`` on ``Agg`` output mode (nipreps#892)
  * ENH: Refactored long strings to a :mod:`mriqc.messages` module (nipreps#901)
  * ENH: Refactored :mod:`mriqc.interfaces.common` module (nipreps#901)
  * DOC: Various fixes to "Running mriqc" section (nipreps#897)
  * MAINT: Revise Docker image settings & CircleCI (nipreps#937)
  * MAINT: Finalize transfer to ``nipreps`` organization (nipreps#936)
  * MAINT: Relicensing to Apache-2.0, for compliance with *NiPreps* and prior transfer to the org (nipreps#930)
  * MAINT: New Docker layer caching system of other *NiPreps* (nipreps#929)
  * MAINT: Code style overhaul (nipreps#901)
  * MAINT: Update ``Dockerfile`` and catch-up with *fMRIPrep*'s (nipreps#924)
  * STY: Run ``black`` at the top of the repo (nipreps#932)

21.0.0rc0

First official release after migrating the repository into the *NiPreps*' organization.
This release updates the Docker image with up-to-date dependencies, updates
*MRIQC*'s codebase to the latest *NiTransforms* and includes some minor bugfixes.
Finally, this release also contains a major code style overhaul by Zvi Baratz (@ZviBaratz).
With thanks to Zvi Baratz, Nikita Beliy, Michael (@octomike), Benjamin Kay, Adam Huffman,
and Ursula Tooley for their contributions.

  * FIX: Revise building documentation at RTD after migration (nipreps#935)
  * FIX: Final touch-ups in the maintenance of Docker image + CI (nipreps#928)
  * FIX: Update unit tests (nipreps#927)
  * FIX: Update dependencies and repair BOLD workflow accordingly (nipreps#926)
  * FIX: Update dependencies and repair T1w workflow accordingly (nipreps#925)
  * FIX: Set ``matplotlib`` on ``Agg`` output mode (nipreps#892)
  * ENH: Refactored long strings to a :mod:`mriqc.messages` module (nipreps#901)
  * ENH: Refactored :mod:`mriqc.interfaces.common` module (nipreps#901)
  * DOC: Various fixes to "Running mriqc" section (nipreps#897)
  * MAINT: Revise Docker image settings & CircleCI (nipreps#937)
  * MAINT: Finalize transfer to ``nipreps`` organization (nipreps#936)
  * MAINT: Relicensing to Apache-2.0, for compliance with *NiPreps* and prior transfer to the org (nipreps#930)
  * MAINT: New Docker layer caching system of other *NiPreps* (nipreps#929)
  * MAINT: Code style overhaul (nipreps#901)
  * MAINT: Update ``Dockerfile`` and catch-up with *fMRIPrep*'s (nipreps#924)
  * STY: Run ``black`` at the top of the repo (nipreps#932)

0.16.1 (January 30, 2021)

Bug-fix release in 0.16.x series.

This PR improves BIDS Derivatives compliance, fixes an issue with reading datasets with
subjects of the form ``sub-sXYZ``, and improves compatibility with more recent matplotlib.

  * FIX: Participant labels starting with ``[sub]`` cannot be used (nipreps#890)
  * FIX: Change deprecated ``normed`` to ``density`` in parameters to ``hist()`` (nipreps#888)
  * ENH: Write derivatives metadata (nipreps#885)
  * ENH: Add --pdb option to make debugging easier (nipreps#884)

0.16.0 (January 5, 2021)

New feature release in 0.16.x series.

This version removes the FSL dependency from the fMRI workflow.

  * FIX: Skip version cache on read-only filesystems (nipreps#862)
  * FIX: Honor ``$OMP_NUM_THREADS`` environment variable (nipreps#848)
  * RF: Simplify comprehensions, using easy-to-read var names (nipreps#875)
  * RF: Free the fMRI workflow from FSL (nipreps#842)
  * CI: Fix up Circle builds (nipreps#876)
  * CI: Update machine images on Circle (nipreps#874)

0.15.3 (September 18, 2020)

===========================
A bugfix release to re-enable setting of `--omp-nthreads/--ants-nthreads`.

  * FIX: omp nthreads typo

0.15.2

Release Notes
-------------
A bugfix release containing mostly maintenance actions and documentation improvements. This version drops Python 3.5. The core of MRIQC has adopted the config-module pattern from fMRIPrep.

With thanks to A. Erramuzpe, @justbennet, U. Tooley, and A. Huffman for contributions.

CHANGES
-------

  * RF: Adopt config module pattern from *fMRIPrep* (nipreps#837)
  * MAINT: Clear the clutter of warnings (nipreps#838)
  * MAINT: Drop Python 3.5, simplify linting (nipreps#833)
  * MAINT: Update to latest Ubuntu Xenial tag (nipreps#814)
  * MAINT: Centralize all requirements and versions on ``setup.cfg`` (nipreps#819)
  * MAINT: Use recent Python image to build packages in CircleCI (nipreps#808)
  * DOC: Improve AQI (and other IQMs) and boxplot whiskers descriptions (nipreps#816)
  * DOC: Refactor how documentation is built on CircleCI (nipreps#818)
  * DOC: Corrected a couple of typos in ``--help`` text (nipreps#809)

fix(circleCI): split deploy build into Docker and Pypi nipreps#801

rel(0.15.1): Update CHANGES [skip ci]

rel(0.15.0): Update CHANGES [skip ci]