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Fix globbing bug in splitp #221

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merged 4 commits into from
Jul 24, 2020
Merged

Fix globbing bug in splitp #221

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a251b09
Fix globbing bug in splitp
emschorsch Jun 19, 2020
9bdd737
infer compression from first chromosome present
emschorsch Jun 19, 2020
bf2df25
undo _split change
emschorsch Jun 19, 2020
85ad283
undo moving function location
emschorsch Jun 19, 2020
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undo _split change
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@emschorsch
emschorsch authored Jun 19, 2020
commit bf2df25bbad878053ac5ce0e9091a22ef046aa59
6 changes: 2 additions & 4 deletions ldscore/sumstats.py
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Original file line number Diff line number Diff line change
Expand Up @@ -50,10 +50,8 @@

def _splitp(fstr):
flist = fstr.split(',')
paths = []
for x in [os.path.expanduser(os.path.expandvars(x)) for x in flist]:
paths.extend(glob.glob(x))
return paths
flist = [os.path.expanduser(os.path.expandvars(x)) for x in flist]
return flist


def _select_and_log(x, ii, log, msg):
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