Qdm 2022 qrda export (openemr#5046)

* Added 5.6 QDM models, and a readme how to generate new models * merge date helper * Intermediate * intermediate * ported a bunch of Ruby code to support Cat III to PHP * intermediate * finished porting coding only, haven't run/tested * Hook up basic rendering of Cat3 XML * intermediate, walking through template population * intermediate * intermedite: added in result calculator * fix input to export service, now just requires array of measure strings * added patient addresses and telcoms for qrda cat 1 export * Updated mustache templates to 3.1.8 qrda-reports Found we were using a newer version of the mustache templates then what we will test against for ONC. I've gone ahead and changed those to the old version for the Cat 3 reports. Also found that the templates using the ruby-ism of ? to denote a boolean question can't be processed in PHP. So I've switched the templates that use the functionName? to drop the question mark which allows those functions to actually execute correctly. * Updated to latest oe-cqm-module version. * resolve patient extension * fix date format for JSON cqm calculation, add result to procedure QDM * fix typos in query * fix styling * trying to fix styles again * try fixing style again Co-authored-by: Stephen Nielson <snielson@discoverandchange.com>
bradymiller · Mar 29, 2022 · 5ff37bc · 5ff37bc
1 parent c45b386
commit 5ff37bc
Showing 222 changed files with 8,350 additions and 1,564 deletions.
diff --git a/composer.json b/composer.json
@@ -69,7 +69,8 @@
         "vlucas/phpdotenv": "5.4.1",
         "waryway/php-traits-library": "1.0.4",
         "yubico/u2flib-server": "1.0.2",
-        "openemr/mustache": "2.15.2"
+        "openemr/mustache": "2.15.2",
+        "openemr/oe-module-cqm": "dev-main"
     },
     "config": {
         "platform": {

diff --git a/composer.lock b/composer.lock
diff --git a/src/Cqm/Generator.php b/src/Cqm/Generator.php
@@ -49,9 +49,8 @@ public function execute()
         $datatypes = [];
         $extends = [];
         $hqmfOid_to_datatype_map = [];
-        $root = $GLOBALS['fileroot'];
-        $oids_file = __DIR__ . '/oids_qdm_5.5.json';
-        $modelinfo_file = __DIR__ . '/qdm-modelinfo-5.5.xml';
+        $oids_file = __DIR__ . '/oids_qdm_5.6.json';
+        $modelinfo_file = __DIR__ . '/qdm-modelinfo-5.6.xml';
         $modelinfo = simplexml_load_string(file_get_contents($modelinfo_file));
         $oids = json_decode(file_get_contents($oids_file), true);
 
@@ -106,7 +105,7 @@ public function execute()
                 // If there's no label, check if there is a "positive" profile
                 $positive_profile_element = $modelinfo->xpath("/ns4:modelInfo/ns4:typeInfo[@xsi:type='ns4:ProfileInfo'][@identifier='Positive$datatype_name']")[0];
                 if ($positive_profile_element !== null) {
-                    $positive_profile = (string)$positive_profile_element->attributes();
+                    $positive_profile = $positive_profile_element->attributes();
                     if (!empty((string)$positive_profile->label)) {
                         $qdm_title = (string)$positive_profile->label;
                     }
@@ -133,7 +132,10 @@ public function execute()
             }
 
             // Add the extra info that is manually maintained in the "oids" file
-            $extra_info = $oids[$this->underscore($datatype_name)];
+            $extra_info = null;
+            if (isset($oids[$this->underscore($datatype_name)])) {
+                $extra_info = $oids[$this->underscore($datatype_name)];
+            }
             if ($extra_info !== null) {
                 if (isset($extra_info['hqmf_oid'])) {
                     $attributes[] = [
@@ -247,14 +249,17 @@ public function execute()
                 'classes' => [$class]
             ]);
             $code = $file->generate();
-            $dir = __DIR__;
-            // $dir = '/Users/kchapple/Dev/openemr/openemr/src/Cqm';
-            mkdir($dir . '/Qdm');
-            $filename = $dir . '/Qdm/' . $datatype . '.php';
-            file_put_contents($filename, $code);
+            $qdm_dir = __DIR__ . DIRECTORY_SEPARATOR . 'Qdm';
+            if (!file_exists($qdm_dir)) {
+                mkdir($qdm_dir);
+            }
+            $filename = $qdm_dir . DIRECTORY_SEPARATOR . $datatype . '.php';
+            if (false === file_put_contents($filename, $code)) {
+                error_log("Error writing to QDM Model file: `$filename`");
+            }
         }
 
-        file_put_contents($dir . '/hqmfOid_to_datatype_map.json', json_encode($hqmfOid_to_datatype_map));
+        file_put_contents(__DIR__ . '/hqmfOid_to_datatype_map.json', json_encode($hqmfOid_to_datatype_map));
     }
 
     public function underscore($input)

diff --git a/src/Cqm/Qdm/AdverseEvent.php b/src/Cqm/Qdm/AdverseEvent.php
@@ -1,4 +1,11 @@
 <?php
+/**
+ * @package OpenEMR
+ * @link      http://www.open-emr.org
+ * @author    Ken Chapple <ken@mi-squared.com>
+ * @copyright Copyright (c) 2021 Ken Chapple <ken@mi-squared.com>
+ * @license   https://github.com/openemr/openemr/blob/master/LICENSE GNU GeneralPublic License 3
+ */
 
 namespace OpenEMR\Cqm\Qdm;
 
@@ -7,14 +14,13 @@
  *
  * This is a class generated with Laminas\Code\Generator.
  *
- * @QDM Version 5.5
+ * @QDM Version 5.6
  * @author Ken Chapple <ken@mi-squared.com>
  * @license https://github.com/openemr/openemr/blob/master/LICENSE GNU General
  * Public License 3
  */
 class AdverseEvent extends QDMBaseType
 {
-
     /**
      * @property BaseTypes\DateTime $authorDatetime
      */
@@ -72,3 +78,4 @@ class AdverseEvent extends QDMBaseType
 
     public $_type = 'QDM::AdverseEvent';
 }
+
diff --git a/src/Cqm/Qdm/AllergyIntolerance.php b/src/Cqm/Qdm/AllergyIntolerance.php
@@ -1,4 +1,11 @@
 <?php
+/**
+ * @package OpenEMR
+ * @link      http://www.open-emr.org
+ * @author    Ken Chapple <ken@mi-squared.com>
+ * @copyright Copyright (c) 2021 Ken Chapple <ken@mi-squared.com>
+ * @license   https://github.com/openemr/openemr/blob/master/LICENSE GNU GeneralPublic License 3
+ */
 
 namespace OpenEMR\Cqm\Qdm;
 
@@ -7,14 +14,13 @@
  *
  * This is a class generated with Laminas\Code\Generator.
  *
- * @QDM Version 5.5
+ * @QDM Version 5.6
  * @author Ken Chapple <ken@mi-squared.com>
  * @license https://github.com/openemr/openemr/blob/master/LICENSE GNU General
  * Public License 3
  */
 class AllergyIntolerance extends QDMBaseType
 {
-
     /**
      * @property BaseTypes\DateTime $authorDatetime
      */
@@ -67,3 +73,4 @@ class AllergyIntolerance extends QDMBaseType
 
     public $_type = 'QDM::AllergyIntolerance';
 }
+
diff --git a/src/Cqm/Qdm/AssessmentOrder.php b/src/Cqm/Qdm/AssessmentOrder.php
@@ -1,4 +1,11 @@
 <?php
+/**
+ * @package OpenEMR
+ * @link      http://www.open-emr.org
+ * @author    Ken Chapple <ken@mi-squared.com>
+ * @copyright Copyright (c) 2021 Ken Chapple <ken@mi-squared.com>
+ * @license   https://github.com/openemr/openemr/blob/master/LICENSE GNU GeneralPublic License 3
+ */
 
 namespace OpenEMR\Cqm\Qdm;
 
@@ -7,14 +14,13 @@
  *
  * This is a class generated with Laminas\Code\Generator.
  *
- * @QDM Version 5.5
+ * @QDM Version 5.6
  * @author Ken Chapple <ken@mi-squared.com>
  * @license https://github.com/openemr/openemr/blob/master/LICENSE GNU General
  * Public License 3
  */
 class AssessmentOrder extends QDMBaseType
 {
-
     /**
      * @property BaseTypes\DateTime $authorDatetime
      */
@@ -35,6 +41,11 @@ class AssessmentOrder extends QDMBaseType
      */
     public $requester = null;
 
+    /**
+     * @property string $qdmTitle
+     */
+    public $qdmTitle = 'Assessment, Order';
+
     /**
      * @property string $hqmfOid
      */
@@ -57,3 +68,4 @@ class AssessmentOrder extends QDMBaseType
 
     public $_type = 'QDM::AssessmentOrder';
 }
+