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1. htslib_howto htslib_howto Public

   Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts

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2. CPP CPP Public

   This repo contains CPP scripts to perform certain tasks

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3. nf_genomics_pipelines nf_genomics_pipelines Public

   This repo contains pipeline implemented using the nextflow workflow management system for the analysis of genomics data

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4. fasta_parser fasta_parser Public

   Small package used to parse a file in the Fasta format

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5. Variation_studies Variation_studies Public

   This repo contains code and notebooks relevant for the analysis of genomic variation data

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6. course_material course_material Public

   This directory contains material that I've used in different courses

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