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ds000247: Fix CoordinateSystem: "ctf" => "CTF" (#218)
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* Update sub-0004_ses-0001_coordsystem.json

* Update sub-0006_ses-0001_coordsystem.json

* Update sub-0007_ses-0001_coordsystem.json

* Update sub-0002_ses-0001_coordsystem.json

* Update sub-0003_ses-0001_coordsystem.json

* Rename: space-MNI152NLin6Sym, CoordinateSystem: Other

* Rename: space-MNI152NLin6Sym

* Revert modifications (post in a separate PR)

* Revert modifications (post in a separate PR)

* other=>Other

* Revert change, committed on a separate PR

Co-authored-by: Stefan Appelhoff <stefan.appelhoff@mailbox.org>
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ftadel and sappelhoff authored Jan 14, 2021
1 parent 9f1f072 commit 370f7c5
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Original file line number Diff line number Diff line change
@@ -1 +1,33 @@
{"MEGCoordinateSystem":"ctf","MEGCoordinateUnits":"cm","MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","EEGCoordinateSystem":"ctf","EEGCoordinateUnits":"cm","EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","IntendedFor":"/sub-0002/ses-0001/anat/sub-0002_ses-0001_T1w.nii.gz","HeadCoilCoordinates":{"coil1":[9.56534852,-0.02049955,0.02450495],"coil2":[-0.05239806,6.99865792,-0.02399622],"coil3":[0.08603075,-6.93959265,-0.0391808]},"HeadCoilCoordinateSystem":"ctf","HeadCoilCoordinateUnits":"cm","HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","DigitizedHeadPoints":"/sub-0002/ses-0001/meg/sub-0002_ses-0001_task-rest_run-01_headshape.pos","DigitizedHeadPointsCoordinateSystem":"ctf","DigitizedHeadPointsCoordinateUnits":"cm","DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"}
{
"MEGCoordinateSystem": "CTF",
"MEGCoordinateUnits": "cm",
"MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"EEGCoordinateSystem": "CTF",
"EEGCoordinateUnits": "cm",
"EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"IntendedFor": "/sub-0002/ses-0001/anat/sub-0002_ses-0001_T1w.nii.gz",
"HeadCoilCoordinates": {
"coil1": [
9.56534852,
-0.02049955,
0.02450495
],
"coil2": [
-0.05239806,
6.99865792,
-0.02399622
],
"coil3": [
0.08603075,
-6.93959265,
-0.0391808
]
},
"HeadCoilCoordinateSystem": "CTF",
"HeadCoilCoordinateUnits": "cm",
"HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"DigitizedHeadPoints": "/sub-0002/ses-0001/meg/sub-0002_ses-0001_task-rest_run-01_headshape.pos",
"DigitizedHeadPointsCoordinateSystem": "CTF",
"DigitizedHeadPointsCoordinateUnits": "cm",
"DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"
}
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@@ -1 +1,33 @@
{"MEGCoordinateSystem":"ctf","MEGCoordinateUnits":"cm","MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","EEGCoordinateSystem":"ctf","EEGCoordinateUnits":"cm","EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","IntendedFor":"ds000247_R1.0.0/sub-0003/ses-0001/anat/sub-0003_ses-0001_T1w.nii.gz","HeadCoilCoordinates":{"coil1":[8.85858694,-0.03575081,-0.04373216],"coil2":[-0.07004992,6.50785355,-0.03645591],"coil3":[-0.09460733,-6.50460021,0.07703488]},"HeadCoilCoordinateSystem":"ctf","HeadCoilCoordinateUnits":"cm","HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","DigitizedHeadPoints":"sub-0003/ses-0001/meg/sub-0003_ses-0001_task-rest_run-01_headshape.pos","DigitizedHeadPointsCoordinateSystem":"ctf","DigitizedHeadPointsCoordinateUnits":"cm","DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"}
{
"MEGCoordinateSystem": "CTF",
"MEGCoordinateUnits": "cm",
"MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"EEGCoordinateSystem": "CTF",
"EEGCoordinateUnits": "cm",
"EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"IntendedFor": "ds000247_R1.0.0/sub-0003/ses-0001/anat/sub-0003_ses-0001_T1w.nii.gz",
"HeadCoilCoordinates": {
"coil1": [
8.85858694,
-0.03575081,
-0.04373216
],
"coil2": [
-0.07004992,
6.50785355,
-0.03645591
],
"coil3": [
-0.09460733,
-6.50460021,
0.07703488
]
},
"HeadCoilCoordinateSystem": "CTF",
"HeadCoilCoordinateUnits": "cm",
"HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"DigitizedHeadPoints": "sub-0003/ses-0001/meg/sub-0003_ses-0001_task-rest_run-01_headshape.pos",
"DigitizedHeadPointsCoordinateSystem": "CTF",
"DigitizedHeadPointsCoordinateUnits": "cm",
"DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"
}
Original file line number Diff line number Diff line change
@@ -1 +1,18 @@
{"MEGCoordinateSystem":"ctf","MEGCoordinateUnits":"cm","MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","EEGCoordinateSystem":"ctf","EEGCoordinateUnits":"cm","EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","IntendedFor":"ds000247_R1.0.0/sub-0004/ses-0001/anat/sub-0004_ses-0001_T1w.nii.gz","HeadCoilCoordinates":{"coil1":[9.83194534,-0.00051169,0.11186294],"coil2":[-0.00611115,6.57947207,-0.10370692],"coil3":[-0.01775799,-6.61022433,-0.00735681]},"HeadCoilCoordinateSystem":"ctf","HeadCoilCoordinateUnits":"cm","HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","DigitizedHeadPoints":"sub-0004/ses-0001/meg/sub-0004_ses-0001_task-rest_run-01_headshape.pos","DigitizedHeadPointsCoordinateSystem":"ctf","DigitizedHeadPointsCoordinateUnits":"cm","DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"}
{"MEGCoordinateSystem":"CTF",
"MEGCoordinateUnits":"cm",
"MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"EEGCoordinateSystem":"CTF",
"EEGCoordinateUnits":"cm",
"EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"IntendedFor":"ds000247_R1.0.0/sub-0004/ses-0001/anat/sub-0004_ses-0001_T1w.nii.gz",
"HeadCoilCoordinates":{
"coil1":[9.83194534,-0.00051169,0.11186294],
"coil2":[-0.00611115,6.57947207,-0.10370692],
"coil3":[-0.01775799,-6.61022433,-0.00735681]},
"HeadCoilCoordinateSystem":"CTF",
"HeadCoilCoordinateUnits":"cm",
"HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"DigitizedHeadPoints":"sub-0004/ses-0001/meg/sub-0004_ses-0001_task-rest_run-01_headshape.pos",
"DigitizedHeadPointsCoordinateSystem":"CTF",
"DigitizedHeadPointsCoordinateUnits":"cm",
"DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"}
Original file line number Diff line number Diff line change
@@ -1 +1,18 @@
{"MEGCoordinateSystem":"ctf","MEGCoordinateUnits":"cm","MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","EEGCoordinateSystem":"ctf","EEGCoordinateUnits":"cm","EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","IntendedFor":"/sub-0006/ses-0001/anat/sub-0006_ses-0001_T1w.nii.gz","HeadCoilCoordinates":{"coil1":[10.35104974,-0.00501147,-0.02433402],"coil2":[0.42711852,7.16157294,0.00237986],"coil3":[-0.40022443,-7.17409406,0.0281395]},"HeadCoilCoordinateSystem":"ctf","HeadCoilCoordinateUnits":"cm","HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","DigitizedHeadPoints":"sub-0006/ses-0001/meg/sub-0006_ses-0001_task-rest_run-01_headshape.pos","DigitizedHeadPointsCoordinateSystem":"ctf","DigitizedHeadPointsCoordinateUnits":"cm","DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"}
{"MEGCoordinateSystem":"CTF",
"MEGCoordinateUnits":"cm",
"MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"EEGCoordinateSystem":"CTF",
"EEGCoordinateUnits":"cm",
"EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"IntendedFor":"/sub-0006/ses-0001/anat/sub-0006_ses-0001_T1w.nii.gz",
"HeadCoilCoordinates":{
"coil1":[10.35104974,-0.00501147,-0.02433402],
"coil2":[0.42711852,7.16157294,0.00237986],
"coil3":[-0.40022443,-7.17409406,0.0281395]},
"HeadCoilCoordinateSystem":"CTF",
"HeadCoilCoordinateUnits":"cm",
"HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"DigitizedHeadPoints":"sub-0006/ses-0001/meg/sub-0006_ses-0001_task-rest_run-01_headshape.pos",
"DigitizedHeadPointsCoordinateSystem":"CTF",
"DigitizedHeadPointsCoordinateUnits":"cm",
"DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"}
Original file line number Diff line number Diff line change
@@ -1 +1,18 @@
{"MEGCoordinateSystem":"ctf","MEGCoordinateUnits":"cm","MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","EEGCoordinateSystem":"ctf","EEGCoordinateUnits":"cm","EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","IntendedFor":"/sub-0007/ses-0001/anat/sub-0007_ses-0001_T1w.nii.gz","HeadCoilCoordinates":{"coil1":[9.64081113,0.05215993,0.05933768],"coil2":[-0.03473186,7.06730299,-0.07866974],"coil3":[0.01670353,-7.12784147,-0.01598252]},"HeadCoilCoordinateSystem":"ctf","HeadCoilCoordinateUnits":"cm","HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y","DigitizedHeadPoints":"sub-0007/ses-0001/meg/sub-0007_ses-0001_task-rest_run-01_headshape.pos","DigitizedHeadPointsCoordinateSystem":"ctf","DigitizedHeadPointsCoordinateUnits":"cm","DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"}
{"MEGCoordinateSystem":"CTF",
"MEGCoordinateUnits":"cm",
"MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"EEGCoordinateSystem":"CTF",
"EEGCoordinateUnits":"cm",
"EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"IntendedFor":"/sub-0007/ses-0001/anat/sub-0007_ses-0001_T1w.nii.gz",
"HeadCoilCoordinates":{
"coil1":[9.64081113,0.05215993,0.05933768],
"coil2":[-0.03473186,7.06730299,-0.07866974],
"coil3":[0.01670353,-7.12784147,-0.01598252]},
"HeadCoilCoordinateSystem":"CTF",
"HeadCoilCoordinateUnits":"cm",
"HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y",
"DigitizedHeadPoints":"sub-0007/ses-0001/meg/sub-0007_ses-0001_task-rest_run-01_headshape.pos",
"DigitizedHeadPointsCoordinateSystem":"CTF",
"DigitizedHeadPointsCoordinateUnits":"cm",
"DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"}
Original file line number Diff line number Diff line change
Expand Up @@ -5,4 +5,4 @@
"iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with Brainstorm on the post-implanation T1 MRI",
"iEEGCoordinateProcessingReference": "https://neuroimage.usc.edu/brainstorm/Tutorials/ECoG",
"IntendedFor": "sub-ecog01/ses-postimp/anat/sub-ecog01_ses-postimp_T1w.nii.gz"
}
}

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