alisterburt
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RoMa: A lightweight library to deal with 3D rotations in PyTorch.
[ECCV 2024 - Oral] ACE0 is a learning-based structure-from-motion approach that estimates camera parameters of sets of images by learning a multi-view consistent, implicit scene representation.
a tool for using surfaces to explore volumetric data in napari
Jupyter-based tool for membrane segmentation manipulation
Python package to generate random human-readable strings, e.g. project and experiment names
Guide to python package development for scientists
RViz plugins package for visualizing custom info and misc. operations
N-dimensional NumPy array tiling and merging with overlapping, padding and tapering
Scientific colormaps for python, with only numpy dependency
Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
You like pytorch? You like micrograd? You love tinygrad! ❤️
A napari plugin for clustering objects according to their properties.
A Python implementation of the MRC2014 file format
Lightning fast C++/CUDA neural network framework
Differentiable Quantum Chemistry (only Differentiable Density Functional Theory and Hartree Fock at the moment)
A napari plugin to inspect data within a cisTEM project
GPU-accelerated general purpose image processing and image analysis in napari
Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction
An Ilastik-like interactive pixel classifier.
Decorators to make it easier to write SciPy LowLevelCallables
Speed up coding/extending image analysis in Python.