This folder includes supplements codes for "Differential Analysis of Chromatin Accessibility and Histone Modifications for Predicting Mouse Developmental Enhancers, Fu et al.", which is accepted by Nucleic Acid Res.

Contains scripts to plot main and supplement figures.

Contains scripts to perform uniform pipeline(Fig. S1) on different algorithm.

Contains other scripts to get count, length, consistency, PR-AUC and other metrics.

Contains a pipeline for differential signal enhancer prediction with H3K27ac ChIP-seq and DNase-seq data.