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Minor fixes to the notebook. (kubeflow#427)
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* Need to fix the import and compile commands.

* Check if an experiment with the name already exists.
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@jlewi @k8s-ci-robot
jlewi authored and k8s-ci-robot committed Jan 15, 2019
1 parent 8f32202 commit 46a7956
Showing 1 changed file with 104 additions and 12 deletions.
116 changes: 104 additions & 12 deletions code_search/pipeline/CodeSearchPipelineNotebook.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -9,9 +9,68 @@
},
{
"cell_type": "code",
"execution_count": null,
"execution_count": 1,
"metadata": {},
"outputs": [],
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Collecting https://storage.googleapis.com/ml-pipeline/release/0.1.3/kfp.tar.gz\n",
"\u001b[?25l Downloading https://storage.googleapis.com/ml-pipeline/release/0.1.3/kfp.tar.gz (69kB)\n",
"\u001b[K 100% |████████████████████████████████| 71kB 4.0MB/s eta 0:00:01\n",
"\u001b[?25hRequirement already satisfied, skipping upgrade: urllib3>=1.15 in /opt/conda/lib/python3.6/site-packages (from kfp==0.1) (1.22)\n",
"Requirement already satisfied, skipping upgrade: six>=1.10 in /opt/conda/lib/python3.6/site-packages (from kfp==0.1) (1.11.0)\n",
"Requirement already satisfied, skipping upgrade: certifi in /opt/conda/lib/python3.6/site-packages (from kfp==0.1) (2018.11.29)\n",
"Requirement already satisfied, skipping upgrade: python-dateutil in /opt/conda/lib/python3.6/site-packages (from kfp==0.1) (2.7.5)\n",
"Requirement already satisfied, skipping upgrade: PyYAML in /opt/conda/lib/python3.6/site-packages (from kfp==0.1) (3.13)\n",
"Requirement already satisfied, skipping upgrade: google-cloud-storage==1.13.0 in /opt/conda/lib/python3.6/site-packages (from kfp==0.1) (1.13.0)\n",
"Collecting kubernetes==8.0.0 (from kfp==0.1)\n",
"\u001b[?25l Downloading https://files.pythonhosted.org/packages/6c/44/f8286fb7a25a4ff29a4dec1b5baa49571eedc2b2edf6ec4b51e4b511ac0f/kubernetes-8.0.0-py2.py3-none-any.whl (1.3MB)\n",
"\u001b[K 100% |████████████████████████████████| 1.4MB 14.9MB/s ta 0:00:01\n",
"\u001b[?25hRequirement already satisfied, skipping upgrade: google-resumable-media>=0.3.1 in /opt/conda/lib/python3.6/site-packages (from google-cloud-storage==1.13.0->kfp==0.1) (0.3.1)\n",
"Requirement already satisfied, skipping upgrade: google-api-core<2.0.0dev,>=0.1.1 in /opt/conda/lib/python3.6/site-packages (from google-cloud-storage==1.13.0->kfp==0.1) (1.6.0)\n",
"Requirement already satisfied, skipping upgrade: google-cloud-core<0.29dev,>=0.28.0 in /opt/conda/lib/python3.6/site-packages (from google-cloud-storage==1.13.0->kfp==0.1) (0.28.1)\n",
"Requirement already satisfied, skipping upgrade: requests in /opt/conda/lib/python3.6/site-packages (from kubernetes==8.0.0->kfp==0.1) (2.18.4)\n",
"Requirement already satisfied, skipping upgrade: google-auth>=1.0.1 in /opt/conda/lib/python3.6/site-packages (from kubernetes==8.0.0->kfp==0.1) (1.6.1)\n",
"Requirement already satisfied, skipping upgrade: setuptools>=21.0.0 in /opt/conda/lib/python3.6/site-packages (from kubernetes==8.0.0->kfp==0.1) (38.4.0)\n",
"Requirement already satisfied, skipping upgrade: websocket-client!=0.40.0,!=0.41.*,!=0.42.*,>=0.32.0 in /opt/conda/lib/python3.6/site-packages (from kubernetes==8.0.0->kfp==0.1) (0.54.0)\n",
"Requirement already satisfied, skipping upgrade: requests-oauthlib in /opt/conda/lib/python3.6/site-packages (from kubernetes==8.0.0->kfp==0.1) (1.0.0)\n",
"Collecting adal>=1.0.2 (from kubernetes==8.0.0->kfp==0.1)\n",
"\u001b[?25l Downloading https://files.pythonhosted.org/packages/2d/2f/14882b8dae0977e85577abde3065c141fb94dbb242adfb80e21797e4f7c9/adal-1.2.0-py2.py3-none-any.whl (52kB)\n",
"\u001b[K 100% |████████████████████████████████| 61kB 20.2MB/s ta 0:00:01\n",
"\u001b[?25hRequirement already satisfied, skipping upgrade: pytz in /opt/conda/lib/python3.6/site-packages (from google-api-core<2.0.0dev,>=0.1.1->google-cloud-storage==1.13.0->kfp==0.1) (2018.7)\n",
"Requirement already satisfied, skipping upgrade: protobuf>=3.4.0 in /opt/conda/lib/python3.6/site-packages (from google-api-core<2.0.0dev,>=0.1.1->google-cloud-storage==1.13.0->kfp==0.1) (3.6.1)\n",
"Requirement already satisfied, skipping upgrade: googleapis-common-protos!=1.5.4,<2.0dev,>=1.5.3 in /opt/conda/lib/python3.6/site-packages (from google-api-core<2.0.0dev,>=0.1.1->google-cloud-storage==1.13.0->kfp==0.1) (1.5.5)\n",
"Requirement already satisfied, skipping upgrade: chardet<3.1.0,>=3.0.2 in /opt/conda/lib/python3.6/site-packages (from requests->kubernetes==8.0.0->kfp==0.1) (3.0.4)\n",
"Requirement already satisfied, skipping upgrade: idna<2.7,>=2.5 in /opt/conda/lib/python3.6/site-packages (from requests->kubernetes==8.0.0->kfp==0.1) (2.6)\n",
"Requirement already satisfied, skipping upgrade: cachetools>=2.0.0 in /opt/conda/lib/python3.6/site-packages (from google-auth>=1.0.1->kubernetes==8.0.0->kfp==0.1) (3.0.0)\n",
"Requirement already satisfied, skipping upgrade: pyasn1-modules>=0.2.1 in /opt/conda/lib/python3.6/site-packages (from google-auth>=1.0.1->kubernetes==8.0.0->kfp==0.1) (0.2.2)\n",
"Requirement already satisfied, skipping upgrade: rsa>=3.1.4 in /opt/conda/lib/python3.6/site-packages (from google-auth>=1.0.1->kubernetes==8.0.0->kfp==0.1) (4.0)\n",
"Requirement already satisfied, skipping upgrade: oauthlib>=0.6.2 in /opt/conda/lib/python3.6/site-packages (from requests-oauthlib->kubernetes==8.0.0->kfp==0.1) (2.1.0)\n",
"Collecting PyJWT>=1.0.0 (from adal>=1.0.2->kubernetes==8.0.0->kfp==0.1)\n",
" Downloading https://files.pythonhosted.org/packages/87/8b/6a9f14b5f781697e51259d81657e6048fd31a113229cf346880bb7545565/PyJWT-1.7.1-py2.py3-none-any.whl\n",
"Requirement already satisfied, skipping upgrade: cryptography>=1.1.0 in /opt/conda/lib/python3.6/site-packages (from adal>=1.0.2->kubernetes==8.0.0->kfp==0.1) (2.1.4)\n",
"Requirement already satisfied, skipping upgrade: pyasn1<0.5.0,>=0.4.1 in /opt/conda/lib/python3.6/site-packages (from pyasn1-modules>=0.2.1->google-auth>=1.0.1->kubernetes==8.0.0->kfp==0.1) (0.4.4)\n",
"Requirement already satisfied, skipping upgrade: asn1crypto>=0.21.0 in /opt/conda/lib/python3.6/site-packages (from cryptography>=1.1.0->adal>=1.0.2->kubernetes==8.0.0->kfp==0.1) (0.24.0)\n",
"Requirement already satisfied, skipping upgrade: cffi>=1.7 in /opt/conda/lib/python3.6/site-packages (from cryptography>=1.1.0->adal>=1.0.2->kubernetes==8.0.0->kfp==0.1) (1.11.4)\n",
"Requirement already satisfied, skipping upgrade: pycparser in /opt/conda/lib/python3.6/site-packages (from cffi>=1.7->cryptography>=1.1.0->adal>=1.0.2->kubernetes==8.0.0->kfp==0.1) (2.18)\n",
"Building wheels for collected packages: kfp\n",
" Running setup.py bdist_wheel for kfp ... \u001b[?25ldone\n",
"\u001b[?25h Stored in directory: /tmp/pip-ephem-wheel-cache-yt23ripq/wheels/00/ab/c6/a055a8d8730d1b5b508b0d9ac42f12b531b1bbf575b31efe73\n",
"Successfully built kfp\n",
"\u001b[31mfairing 0.0.3 has requirement kubernetes==6.0.0, but you'll have kubernetes 8.0.0 which is incompatible.\u001b[0m\n",
"Installing collected packages: PyJWT, adal, kubernetes, kfp\n",
" Found existing installation: kubernetes 6.0.0\n",
" Uninstalling kubernetes-6.0.0:\n",
" Successfully uninstalled kubernetes-6.0.0\n",
" Found existing installation: kfp 0.1\n",
" Uninstalling kfp-0.1:\n",
" Successfully uninstalled kfp-0.1\n",
"Successfully installed PyJWT-1.7.1 adal-1.2.0 kfp-0.1 kubernetes-8.0.0\n"
]
}
],
"source": [
"!pip3 install https://storage.googleapis.com/ml-pipeline/release/0.1.3/kfp.tar.gz --upgrade"
]
Expand All @@ -25,7 +84,7 @@
},
{
"cell_type": "code",
"execution_count": null,
"execution_count": 2,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -43,11 +102,11 @@
},
{
"cell_type": "code",
"execution_count": null,
"execution_count": 9,
"metadata": {},
"outputs": [],
"source": [
"from cs_pipeline import github_code_index_update"
"import index_update_pipeline"
]
},
{
Expand All @@ -59,26 +118,59 @@
},
{
"cell_type": "code",
"execution_count": null,
"execution_count": 27,
"metadata": {},
"outputs": [],
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Found experiment with name: jlewi-notebook-test\n"
]
}
],
"source": [
"client = kfp.Client()\n",
"exp = client.create_experiment(name='code-search-25')"
"name = 'jlewi-notebook-test'\n",
"\n",
"exp = None\n",
"experiments = client.list_experiments()\n",
"for e in experiments.experiments:\n",
" if e.name == name:\n",
" print(\"Found experiment with name: %s\" % name)\n",
" exp = e\n",
" break\n",
" \n",
"if not exp: \n",
" print(\"Creating new experiment\")\n",
" exp = client.create_experiment(name=name)"
]
},
{
"cell_type": "code",
"execution_count": null,
"execution_count": 13,
"metadata": {},
"outputs": [],
"outputs": [
{
"data": {
"text/html": [
"Run link <a href=\"/pipeline/#/runs/details/dd14a369-fcb0-11e8-a5c5-42010a8e0036\" target=\"_blank\" >here</a>"
],
"text/plain": [
"<IPython.core.display.HTML object>"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"# Compile it into a tar package.\n",
"compiler.Compiler().compile(github_code_index_update, 'github_code_index_update.tar.gz')\n",
"compiler.Compiler().compile(index_update_pipeline.function_embedding_update, 'function_embedding_update.tar.gz')\n",
"\n",
"# Submit a run.\n",
"# inputs - experiment id, run name, tarball file\n",
"run = client.run_pipeline(exp.id, 'code-search-index-update', 'github_code_index_update.tar.gz')"
"run = client.run_pipeline(exp.id, 'code-search-function-embedding', 'function_embedding_update.tar.gz')"
]
}
],
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