escape the bam string

TORCH-Consortium · Jun 23, 2024 · d399c71 · d399c71
1 parent 7b989e9
commit d399c71
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bin/samplesheet_validation.py b/bin/samplesheet_validation.py
@@ -21,7 +21,7 @@
         reader = csv.DictReader(infile)
 
         writer = csv.DictWriter(outfile,
-                                fieldnames=standard_magma_fields + ['magma_sample_name', 'magma_bam_rg_string'])
+                                fieldnames=standard_magma_fields + ['magma_sample_name', 'magma_bam_rg_string'], escapechar='\\')
         writer.writeheader()
 
         fail = False