##### set the paths to the homes of SLIM-release-comp/apps

# define the path to SLIM-release-comp if installed, or leave it as it is

export SLIM_COMP=absolute_path_to_SLIM-release-comp

# define the path to SLIM-release-apps

export SLIM_APPS=absolute_path_to_SLIM-release-apps

# define the path to personal copy (if other then SLIM_APPS) of SLIM-release-apps

export SLIM_APPS_RUNS=$SLIM_APPS

##### DO NOT MODIFY PAST THIS LINE

# set PATH environment

export PATH=$SLIM_APPS/bin:$SLIM_APPS/ibin:$SLIM_COMP/external/bin:$PATH

hash -r

# set library paths for dynamic compile-time linker

if [ -n "$LD_LIBRARY_PATH" ]; then

export LD_LIBRARY_PATH=$SLIM_COMP/external/lib64:$SLIM_COMP/external/lib:$LD_LIBRARY_PATH

else

export LD_LIBRARY_PATH=$SLIM_COMP/external/lib64:$SLIM_COMP/external/lib

fi

if [ -n "$LD_RUN_PATH" ]; then

export LD_RUN_PATH=$SLIM_COMP/external/lib64:$SLIM_COMP/external/lib:$LD_RUN_PATH

else

export LD_RUN_PATH=$SLIM_COMP/external/lib64:$SLIM_COMP/external/lib

fi

if [ -n "$PYTHONPATH" ]; then

export PYTHONPATH=$SLIM_COMP/external/lib64:$SLIM_COMP/external/lib:$SLIM_COMP/external/pylib:$PYTHONPATH

else

export PYTHONPATH=$SLIM_COMP/external/lib64:$SLIM_COMP/external/lib:$SLIM_COMP/external/pylib

fi

if [ -n "$MANPATH" ]; then

export MANPATH=$SLIM_COMP/external/man:$SLIM_COMP/external/share/man:$MANPATH

else

export MANPATH=$SLIM_COMP/external/man:$SLIM_COMP/external/share/man:`manpath`

fi

# add default MATLABPATH

if [ -n "$MATLABPATH" ]; then

test -d $SLIM_APPS/matlab && export MATLABPATH=$SLIM_APPS/matlab:$MATLABPATH

test -d $SLIM_COMP/matlab && export MATLABPATH=$SLIM_COMP/matlab:$MATLABPATH

else

test -d $SLIM_APPS/matlab && export MATLABPATH=$SLIM_APPS/matlab

test -d $SLIM_COMP/matlab && export MATLABPATH=$SLIM_COMP/matlab:$MATLABPATH

fi

# MADAGASCAR specific setup

export RSFROOT=$SLIM_COMP/external

# Path for binary data files part of RSF datasets

if [ -z "$DATAPATH" ]; then

export DATAPATH=$SLIM_APPS/tmp/

fi

test -d $DATAPATH || mkdir -p $DATAPATH

test -d $DATAPATH || echo "ERROR: Problem creating $DATAPATH"