Test the first five tutorials on CI

RBniCS · Dec 30, 2023 · d05c2e3 · d05c2e3
1 parent e1eaa4f
commit d05c2e3
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Showing 3 changed files with 15 additions and 12 deletions.
diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -20,7 +20,14 @@ jobs:
       - name: Run unit tests
         run: pytest -svv tests/unit
       - name: Run performance tests
-        run: pytest --benchmark-disable tests/performance
+        run: pytest --benchmark-disable -svv tests/performance
+      - name: Run tutorials
+        run: |
+          cd tutorials/01_thermal_block && pytest -svv tutorial_thermal_block.ipynb && cd -
+          cd tutorials/02_elastic_block && pytest -svv tutorial_elastic_block.ipynb && cd -
+          cd tutorials/03_hole && pytest -svv tutorial_hole.ipynb && cd -
+          cd tutorials/04_graetz && pytest -svv tutorial_graetz_1.ipynb && cd -
+          cd tutorials/05_gaussian && pytest -svv tutorial_gaussian_eim.ipynb && cd -
 
   docker:
     if: github.repository == 'RBniCS/RBniCS' && github.ref == 'refs/heads/master'

diff --git a/tutorials/04_graetz/tutorial_graetz_1.ipynb b/tutorials/04_graetz/tutorial_graetz_1.ipynb
@@ -260,7 +260,7 @@
    "source": [
     "lifting_mu = (1.0, 1.0)\n",
     "problem.set_mu(lifting_mu)\n",
-    "reduction_method.initialize_training_set(200, SCM=250)\n",
+    "reduction_method.initialize_training_set(100, SCM=50)\n",
     "reduced_problem = reduction_method.offline()"
    ]
   },
@@ -296,7 +296,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "reduction_method.initialize_testing_set(100, SCM=100)\n",
+    "reduction_method.initialize_testing_set(100, SCM=50)\n",
     "reduction_method.error_analysis(filename=\"error_analysis\")"
    ]
   },

diff --git a/tutorials/conftest.py b/tutorials/conftest.py
@@ -9,7 +9,6 @@
 import sys
 import importlib
 import pytest
-import pytest_flake8
 from nbconvert.exporters import PythonExporter
 import nbconvert.filters
 from mpi4py import MPI
@@ -67,14 +66,11 @@ def ipython2python(code):
         MPI.COMM_WORLD.Barrier()
         # Collect the corresponding .py file
         config = parent.config
-        if config.getoption("--flake8"):
-            return pytest_flake8.pytest_collect_file(file_path.with_suffix(".py"), None, parent)
-        else:
-            if "data" not in str(file_path.parent):  # skip running mesh generation notebooks
-                if not file_path.name.startswith("x"):
-                    return TutorialFile.from_parent(parent=parent, path=file_path.with_suffix(".py"))
-                else:
-                    return DoNothingFile.from_parent(parent=parent, path=file_path.with_suffix(".py"))
+        if "data" not in str(file_path.parent):  # skip running mesh generation notebooks
+            if not file_path.name.startswith("x"):
+                return TutorialFile.from_parent(parent=parent, path=file_path.with_suffix(".py"))
+            else:
+                return DoNothingFile.from_parent(parent=parent, path=file_path.with_suffix(".py"))
     elif file_path.suffix == ".py":  # TODO remove after transition to ipynb is complete? assert never py files?
         if (file_path.name not in "conftest.py"  # do not run pytest configuration file
                 or "data" not in str(file_path.parent)):  # skip running mesh generation notebooks