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sopa
sopa PublicForked from gustaveroussy/sopa
Technology-invariant pipeline for spatial omics analysis (Xenium / MERSCOPE / CosMx / PhenoCycler / MACSima / Hyperion) that scales to millions of cells
Python 1
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LUAD-Spatial
LUAD-Spatial PublicForked from akinaka-dd/LUAD-Spatial
Spatial omics analysis of human LUAD by Visium and PhenoCycler
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phenomenalist
phenomenalist PublicForked from igordot/phenomenalist
Analysis Toolkit for PhenoCycler (CODEX) Data in R
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spatial_mulitplex_immunofluorescence
spatial_mulitplex_immunofluorescence PublicForked from johnF-moore/spatial_mulitplex_immunofluorescence
Code to analyze spatial multiplex immunofluorescence data (CODEX/phenocycler)
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Spatial_small_intestine
Spatial_small_intestine PublicForked from tiroshlab/Spatial_small_intestine
Code for CODEX data
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spatial-bonemarrow-atlas
spatial-bonemarrow-atlas PublicForked from shovikb94/spatial-bonemarrow-atlas
This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Proteomic Profiling Reveals the Cellular Composition and Spatia…
Jupyter Notebook 1
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