diff --git a/docs/source/user_guide/ms_data.rst b/docs/source/user_guide/ms_data.rst index 01cc9feb6..6cae38d26 100644 --- a/docs/source/user_guide/ms_data.rst +++ b/docs/source/user_guide/ms_data.rst @@ -592,11 +592,9 @@ Here, we can assess the purity of the precursor to filter spectra with a score b print("\nPurity scores") print("total:", purity_score.total_intensity) # 9098343.890625 print("target:", purity_score.target_intensity) # 7057944.0 - print( - "signal proportion:", purity_score.signal_proportion - ) # 0.7757394186070014 + print("signal proportion:", purity_score.signal_proportion) # 0.7757394186070014 print("target peak count:", purity_score.target_peak_count) # 1 - print("residual peak count:", purity_score.residual_peak_count) # 4 + print("interfering peak count:", purity_score.interfering_peak_count) # 4 .. code-block:: output @@ -614,7 +612,7 @@ Here, we can assess the purity of the precursor to filter spectra with a score b target: 7057944.0 signal proportion: 0.7757394186070014 target peak count: 1 - residual peak count: 4 + interfering peak count: 4 We could assess that we have four other non-isotopic peaks apart from our precursor and its isotope peaks within our precursor isolation window. The signal of the isotopic peaks correspond to roughly 78% of all intensities in the precursor isolation window.