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more fixes
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cbielow committed Dec 5, 2024
1 parent a0d368d commit bff9e19
Showing 1 changed file with 3 additions and 5 deletions.
8 changes: 3 additions & 5 deletions docs/source/user_guide/ms_data.rst
Original file line number Diff line number Diff line change
Expand Up @@ -592,11 +592,9 @@ Here, we can assess the purity of the precursor to filter spectra with a score b
print("\nPurity scores")
print("total:", purity_score.total_intensity) # 9098343.890625
print("target:", purity_score.target_intensity) # 7057944.0
print(
"signal proportion:", purity_score.signal_proportion
) # 0.7757394186070014
print("signal proportion:", purity_score.signal_proportion) # 0.7757394186070014
print("target peak count:", purity_score.target_peak_count) # 1
print("residual peak count:", purity_score.residual_peak_count) # 4
print("interfering peak count:", purity_score.interfering_peak_count) # 4
.. code-block:: output
Expand All @@ -614,7 +612,7 @@ Here, we can assess the purity of the precursor to filter spectra with a score b
target: 7057944.0
signal proportion: 0.7757394186070014
target peak count: 1
residual peak count: 4
interfering peak count: 4
We could assess that we have four other non-isotopic peaks apart from our precursor and its isotope peaks within our precursor isolation window.
The signal of the isotopic peaks correspond to roughly 78% of all intensities in the precursor isolation window.
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