Feature/hera (#6)

* add hera configs * update compiler and mpi combo * remove tar.gz after download * hera config
NOAA-EMC · aerorahul · Aug 19, 2020 · Aug 18, 2020 · Aug 18, 2020 · Aug 18, 2020
commit 08520f6542126c20f0524a3129029aa560d28597
diff --git a/config/config_hera.sh b/config/config_hera.sh
@@ -0,0 +1,21 @@
+#!/bin/bash
+
+# Compiler/MPI combination
+export HPC_COMPILER="intel/18.0.5.274"
+export HPC_MPI="impi/2018.0.4"
+
+# Build options
+export USE_SUDO=N
+export PKGDIR=pkg
+export LOGDIR=log
+export OVERWRITE=N
+export NTHREADS=8
+export   MAKE_CHECK=N
+export MAKE_VERBOSE=N
+export   MAKE_CLEAN=N
+export DOWNLOAD_ONLY=N
+export STACK_EXIT_ON_FAIL=Y
+export WGET="wget -nv"
+
+# Load these basic modules for Hera
+module load cmake/3.16.1
diff --git a/config/stack_hera.yaml b/config/stack_hera.yaml
@@ -0,0 +1,197 @@
+cmake:
+  build: NO
+  version: 3.17.2
+
+jpeg:
+  build: NO
+  version: 9.1.0
+
+zlib:
+  build: YES
+  shared: NO
+  version: 1.2.11
+
+png:
+  build: YES
+  shared: NO
+  version: 1.6.35
+
+szip:
+  build: YES
+  shared: NO
+  version: 2.1.1
+
+jasper:
+  build: YES
+  shared: NO
+  version: 2.0.15
+
+udunits:
+  build: YES
+  shared: NO
+  version: 2.2.26
+
+hdf5:
+  build: YES
+  version: 1.10.6
+  shared: NO
+  enable_szip: NO
+  enable_zlib: YES
+
+pnetcdf:
+  build: NO
+  version: 1.12.1
+  shared: NO
+
+netcdf:
+  build: YES
+  shared: NO
+  enable_pnetcdf: NO
+  version_c: 4.7.4
+  version_f: 4.5.3
+  version_cxx: 4.3.1
+
+nccmp:
+  build: YES
+  version: 1.8.7.0
+
+nco:
+  build: NO
+  version: 4.9.3
+
+pio:
+  build: YES
+  version: 2.5.1
+  enable_pnetcdf: NO
+
+esmf:
+  build: YES
+  version: 8_1_0_beta_snapshot_00
+  shared: NO
+  enable_pnetcdf: NO
+
+gptl:
+  build: NO
+  version: 8.0.2
+
+fftw:
+  build: NO
+  version: 3.3.8
+
+tau2:
+  build: NO
+  version: 3.25.1
+
+bacio:
+  build: YES
+  version: v2.4.0
+  install_as: 2.4.0
+  openmp: OFF
+
+sigio:
+  build: YES
+  version: v2.3.0
+  install_as: 2.3.0
+  openmp: OFF
+
+sfcio:
+  build: YES
+  version: v1.4.0
+  install_as: 1.4.0
+  openmp: OFF
+
+gfsio:
+  build: YES
+  version: v1.4.0
+  install_as: 1.4.0
+  openmp: OFF
+
+w3nco:
+  build: YES
+  version: v2.4.0
+  install_as: 2.4.0
+  openmp: OFF
+
+sp:
+  build: YES
+  version: v2.3.0
+  install_as: 2.3.0
+  openmp: OFF
+
+ip:
+  build: YES
+  version: v3.3.0
+  install_as: 3.3.0
+  openmp: OFF
+
+ip2:
+  build: YES
+  version: v1.1.0
+  install_as: 1.1.0
+  openmp: OFF
+
+landsfcutil:
+  build: YES
+  version: v2.4.0
+  install_as: 2.4.0
+  openmp: OFF
+
+nemsio:
+  build: YES
+  version: v2.5.1
+  install_as: 2.5.1
+  openmp: OFF
+
+nemsiogfs:
+  build: YES
+  version: v2.5.0
+  install_as: 2.5.0
+  openmp: OFF
+
+w3emc:
+  build: YES
+  version: v2.7.0
+  install_as: 2.7.0
+  openmp: OFF
+
+g2:
+  build: YES
+  version: v3.4.0
+  install_as: 3.4.0
+  openmp: OFF
+
+g2tmpl:
+  build: YES
+  version: v1.9.0
+  install_as: 1.9.0
+  openmp: OFF
+
+crtm:
+  build: YES
+  version: v2.3.0
+  install_as: 2.3.0
+  openmp: OFF
+
+nceppost:
+  build: YES
+  version: dceca26
+  install_as: dceca26
+  openmp: OFF
+
+wrf_io:
+  build: YES
+  version: v1.1.1-cmake
+  install_as: 1.1.1
+  openmp: OFF
+
+bufr:
+  build: YES
+  version: bufr_v11.3.1.1
+  install_as: 11.3.1.1
+  openmp: OFF
+
+wgrib2:
+  build: YES
+  version: v2.0.8-cmake-v1.0.2
+  install_as: 2.0.8
+  openmp: OFF
diff --git a/libs/build_nccmp.sh b/libs/build_nccmp.sh
@@ -7,6 +7,12 @@ version=${1:-${STACK_nccmp_version}}
 
 software=$name-$version
 
+cd ${HPC_STACK_ROOT}/${PKGDIR:-"pkg"}
+
+url="https://gitlab.com/remikz/nccmp/-/archive/$version/${software}.tar.gz"
+[[ -d $software ]] || ( $WGET $url; tar -xf $software.tar.gz && rm -f $software.tar.gz )
+[[ ${DOWNLOAD_ONLY} =~ [yYtT] ]] && exit 0
+
 # Hyphenated version used for install prefix
 compiler=$(echo $HPC_COMPILER | sed 's/\//-/g')
 mpi=$(echo $HPC_MPI | sed 's/\//-/g')
@@ -56,16 +62,10 @@ fi
 LDFLAGS5="-L$NETCDF_ROOT/lib -lnetcdf"
 export LDFLAGS="${LDFLAGS1:-} ${LDFLAGS2:-} ${LDFLAGS3:-} ${LDFLAGS4:-} ${LDFLAGS5:-}"
 
-url="https://gitlab.com/remikz/nccmp/-/archive/$version/${software}.tar.gz"
-
-cd ${HPC_STACK_ROOT}/${PKGDIR:-"pkg"}
-
 # Enable header pad comparison, if netcdf-c src directory exists!
 [[ -d "netcdf-c-$NETCDF_VERSION" ]] && netcdf_src="$PWD/netcdf-c-$NETCDF_VERSION"
 [[ -d "netcdf-c-$NETCDF_VERSION" ]] && extra_confs="--with-netcdf=$netcdf_src"
 
-[[ -d $software ]] || ( $WGET $url; tar -xf $software.tar.gz )
-[[ ${DOWNLOAD_ONLY} =~ [yYtT] ]] && exit 0
 [[ -d $software ]] && cd $software || ( echo "$software does not exist, ABORT!"; exit 1 )
 [[ -d build ]] && rm -rf build
 mkdir -p build && cd build

diff --git a/libs/build_szip.sh b/libs/build_szip.sh
@@ -41,7 +41,7 @@ cd ${HPC_STACK_ROOT}/${PKGDIR:-"pkg"}
 
 software=$name-$version
 url=https://support.hdfgroup.org/ftp/lib-external/szip/$version/src/$software.tar.gz
-[[ -d $software ]] || ( $WGET $url; tar -xf $software.tar.gz )
+[[ -d $software ]] || ( $WGET $url; tar -xf $software.tar.gz && rm -f $software.tar.gz )
 [[ ${DOWNLOAD_ONLY} =~ [yYtT] ]] && exit 0
 [[ -d $software ]] && cd $software || ( echo "$software does not exist, ABORT!"; exit 1 )
 [[ -d build ]] && rm -rf build

diff --git a/libs/build_udunits.sh b/libs/build_udunits.sh
@@ -38,7 +38,7 @@ cd ${HPC_STACK_ROOT}/${PKGDIR:-"pkg"}
 
 software=$name-$version
 url=ftp://ftp.unidata.ucar.edu/pub/udunits/$software.tar.gz
-[[ -d $software ]] || ( $WGET $url; tar xvf $software.tar.gz )
+[[ -d $software ]] || ( $WGET $url; tar xvf $software.tar.gz && rm -f $software.tar.gz )
 [[ ${DOWNLOAD_ONLY} =~ [yYtT] ]] && exit 0
 [[ -d $software ]] && cd $software || ( echo "$software does not exist, ABORT!"; exit 1 )
 [[ -d build ]] && rm -rf build