Fix fastp warning about deprecated barplot hide_empty option #799
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| name: "Integration test" | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - "multiqc/modules/**" | |
| - "pyproject.toml" | |
| pull_request: | |
| paths: | |
| - "multiqc/modules/**" | |
| - "pyproject.toml" | |
| jobs: | |
| integration_test_linux: | |
| name: "Python ${{ matrix.python-version }}" | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| matrix: | |
| python-version: ["3.8", "3.13"] # Oldest and newest supported Python versions | |
| timeout-minutes: 10 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: "Set up Python ${{ matrix.python-version }}" | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| allow-prereleases: true | |
| - name: "Install MultiQC" | |
| run: pip install . | |
| - name: "Download test data" | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MultiQC/test-data | |
| path: test-data | |
| - name: "Run multiqc on all modules" | |
| run: multiqc -fv --strict test-data/data/modules |