typo

MG-RAST · Mar 1, 2018 · 73a127a · 73a127a
1 parent abc117b
commit 73a127a
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bin/seqUtil b/bin/seqUtil
@@ -257,7 +257,7 @@ def fastastd(input, output, minimum, protein, uppercase, iupac, ambig_trim, dna_
     input_handle = open(input, "rU")
     output_handle = open(output, "w")
     remove_handle = open(remove_list, "w") if remove_list else None
-    per_trim = float(ambig_per) / 100.0
+    per_trim = float(per_trim) / 100.0
     iupac_set = IUPAC_AA if protein else IUPAC_DNA
     for record in SeqIO.parse(input_handle, "fasta"):
         if len(record.seq) >= minimum: