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Use Pooch to download sample data
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Add it to `metpy/cbook.py` and include the dependency on setup.py.
Create the registry file using `pooch.make_registry` and stored it in
the `metpy` package.
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@leouieda @jrleeman
leouieda authored and jrleeman committed Aug 23, 2018
1 parent f3f2bda commit b3fc756
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Showing 9 changed files with 185 additions and 21 deletions.
1 change: 0 additions & 1 deletion .appveyor.yml
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Expand Up @@ -37,7 +37,6 @@ install:
build: off

test_script:
- cmd: set TEST_DATA_DIR=%APPVEYOR_BUILD_FOLDER%\\staticdata
- cmd: python setup.py test --addopts "-s --junitxml=tests.xml --flake8 --mpl --cov=metpy"
- cmd: cd docs
- cmd: make overridecheck html
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3 changes: 2 additions & 1 deletion .stickler.yml
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Expand Up @@ -3,4 +3,5 @@ linters:
ignore: 'F405'
max-line-length: 95
files:
ignore: ['metpy/_version.py']
ignore:
- 'metpy/_version.py'
1 change: 1 addition & 0 deletions MANIFEST.in
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Expand Up @@ -5,6 +5,7 @@ include LICENSE
include CONTRIBUTING.md
include versioneer.py
include metpy/_version.py
include metpy/static-data-manifest.txt
recursive-include examples *.py *.txt
recursive-include tutorials *.py *.txt
recursive-include docs *
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1 change: 1 addition & 0 deletions environment.yml
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Expand Up @@ -35,3 +35,4 @@ dependencies:
- cartopy
- doc8
- recommonmark
- pooch=0.1
29 changes: 20 additions & 9 deletions metpy/cbook.py
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Expand Up @@ -4,10 +4,12 @@
"""Collection of generally useful utility code from the cookbook."""

import os
import os.path

from matplotlib.cbook import iterable
import numpy as np
import pooch

from . import __version__

try:
string_type = basestring
Expand All @@ -21,16 +23,25 @@ def is_string_like(s):
return isinstance(s, string_type)


def get_test_data(fname, as_file_obj=True):
"""Access a file from MetPy's collection of test data."""
# Look for an environment variable to point to the test data. If not, try looking at
# the appropriate path relative to this file.
data_dir = os.environ.get('TEST_DATA_DIR',
os.path.join(os.path.dirname(__file__), '..', 'staticdata'))
POOCH = pooch.create(
path=pooch.os_cache('metpy'),
base_url='https://github.com/Unidata/MetPy/raw/{version}/staticdata/',
version=__version__,
version_dev='master',
env='TEST_DATA_DIR')

# Check if we're running from a git clone and if so, bash the path attribute with the path
# to git's local data store (un-versioned)
# Look for the staticdata directory (i.e. this is a git checkout)
if os.path.exists(os.path.join(os.path.dirname(__file__), '..', 'staticdata')):
POOCH.path = os.path.join(os.path.dirname(__file__), '..', 'staticdata')

# Assemble the path
path = os.path.join(data_dir, fname)
POOCH.load_registry(os.path.join(os.path.dirname(__file__), 'static-data-manifest.txt'))


def get_test_data(fname, as_file_obj=True):
"""Access a file from MetPy's collection of test data."""
path = POOCH.fetch(fname)
# If we want a file object, open it, trying to guess whether this should be binary mode
# or not
if as_file_obj:
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11 changes: 5 additions & 6 deletions metpy/io/tests/test_nexrad.py
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Expand Up @@ -4,15 +4,13 @@
"""Test the `nexrad` module."""

from datetime import datetime
import glob
from io import BytesIO
import logging
import os.path

import numpy as np
import pytest

from metpy.cbook import get_test_data
from metpy.cbook import get_test_data, POOCH
from metpy.io import is_precip_mode, Level2File, Level3File

# Turn off the warnings for tests
Expand Down Expand Up @@ -58,7 +56,8 @@ def test_doubled_file():
#
# NIDS/Level 3 Tests
#
nexrad_nids_files = glob.glob(os.path.join(get_test_data('nids', as_file_obj=False), 'K???_*'))
nexrad_nids_files = [get_test_data(fname, as_file_obj=False)
for fname in POOCH.registry if fname.startswith('nids/K')]


@pytest.mark.parametrize('fname', nexrad_nids_files)
Expand All @@ -76,8 +75,8 @@ def test_level3_files(fname):
assert f.filename == fname


tdwr_nids_files = glob.glob(os.path.join(get_test_data('nids', as_file_obj=False),
'Level3_MCI_*'))
tdwr_nids_files = [get_test_data(fname, as_file_obj=False)
for fname in POOCH.registry if fname.startswith('nids/Level3_MCI_')]


@pytest.mark.parametrize('fname', tdwr_nids_files)
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150 changes: 150 additions & 0 deletions metpy/static-data-manifest.txt
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4 changes: 2 additions & 2 deletions metpy/testing.py
View file
Original file line number Diff line number Diff line change
Expand Up @@ -36,14 +36,14 @@ def get_upper_air_data(date, station):
dict : upper air data
"""
soudning_key = '{0:%Y-%m-%dT%HZ}_{1:}'.format(date, station)
sounding_key = '{0:%Y-%m-%dT%HZ}_{1:}'.format(date, station)
sounding_files = {'2016-05-22T00Z_DDC': 'may22_sounding.txt',
'2013-01-20T12Z_OUN': 'jan20_sounding.txt',
'1999-05-04T00Z_OUN': 'may4_sounding.txt',
'2002-11-11T00Z_BNA': 'nov11_sounding.txt',
'2010-12-09T12Z_BOI': 'dec9_sounding.txt'}

fname = sounding_files[soudning_key]
fname = sounding_files[sounding_key]
fobj = get_test_data(fname)

def to_float(s):
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6 changes: 4 additions & 2 deletions setup.py
View file
Original file line number Diff line number Diff line change
Expand Up @@ -46,11 +46,13 @@
package_data={'metpy.plots': ['colortable_files/*.tbl', 'nexrad_tables/*.tbl',
'fonts/*.ttf', '_static/metpy_75x75.png',
'_static/metpy_150x150.png', '_static/unidata_75x75.png',
'_static/unidata_150x150.png']},
'_static/unidata_150x150.png'],
'metpy': ['static-data-manifest.txt']},

python_requires='>=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*',
install_requires=['matplotlib>=1.4', 'numpy>=1.11.0', 'scipy>=0.14',
'pint>=0.8', 'xarray>=0.10.7', 'enum34;python_version<"3.4"'],
'pint>=0.8', 'xarray>=0.10.7', 'enum34;python_version<"3.4"',
'pooch==0.1'],
extras_require={
'cdm': ['pyproj>=1.9.4'],
'dev': ['ipython[all]>=3.1'],
Expand Down

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