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precompile: improve precision of extension dependencies
This change is a slimmed-down version of #55910, without any of the re-factoring. This improves the parallelism of the pre-compile job and fixes a correctness bug, where unconditionally injecting a dependency after its parent could be in conflict with dependencies in between triggers, causing false extension cycles. For example adding `AMDGPU.jl` and `Tracker.jl` in your project reports a false cycle (without this change).
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