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CITATION.cff
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cff-version: 1.2.0
title: pybioclip
message: If you use this software, please cite both the conference paper from references section and the software itself.
type: software
authors:
- given-names: John
family-names: Bradley
- given-names: Hilmar
family-names: Lapp
- family-names: Campolongo
given-names: "Elizabeth G."
identifiers:
- type: doi
value: 10.5281/zenodo.13151194
- description: "The GitHub release URL of tag 1.2.0."
type: url
value: "https://github.com/Imageomics/pybioclip/releases/tag/1.2.0"
- description: "The GitHub URL of the commit tagged with 1.1.0."
type: url
value: "https://github.com/Imageomics/pybioclip/tree/8662c4fd2451dcd169a07342526124585eaefeb2"
repository-code: 'https://github.com/Imageomics/pybioclip'
url: 'https://github.com/Imageomics/pybioclip'
abstract: Python package and command line tool that simplifies using the BioCLIP foundation model.
keywords:
- clip
- biology
- CV
- imageomics
- animals
- species
- images
- taxonomy
- "rare species"
- "endangered species"
- "evolutionary biology"
- multimodal
- "knowledge-guided"
- python
- "command line"
- bioclip
- plants
- fungi
- genus
- "image classification"
license: MIT
version: 1.2.0
date-released: '2024-12-09'
references:
- type: conference-paper
title: "BioCLIP: A Vision Foundation Model for the Tree of Life"
authors:
- family-names: Stevens
given-names: Samuel
- family-names: Wu
given-names: Jiaman
- family-names: Thompson
given-names: "Matthew J."
- family-names: Campolongo
given-names: "Elizabeth G."
- family-names: Song
given-names: "Chan Hee"
- family-names: Carlyn
given-names: "David Edward"
- family-names: Dong
given-names: Li
- family-names: Dahdul
given-names: "Wasila M"
- family-names: Stewart
given-names: Charles
- family-names: "Berger-Wolf"
given-names: Tanya
- family-names: Chao
given-names: "Wei-Lun"
- family-names: Su
given-names: Yu
version: 1.0.0
doi: "10.5281/zenodo.10895871"
date-released: "2024-03-29"