Merge pull request #60 from Gregor-Mendel-Institute/2.0

merge 2.0 > master

Merge pull request #59 from Gregor-Mendel-Institute/1.3.1

Merge 1.3.1 > master

Merge pull request #57 from Gregor-Mendel-Institute/1.3

Merge 1.3 > master

Merge pull request #48 from Gregor-Mendel-Institute/1.2.1

merge 1.2.1 > master

Merge pull request #41 from Gregor-Mendel-Institute/1.2

Merge 1.2 > master

Release V1.1 (#36)

* update logo

* pin pillow version to 7.0.0

pillow 7.1.1 caused an incompatibility with scikit-image ImageCollections

thanks @bisnow33 for reporting the issue

* unpin pillow

regression was fixed in pillow release 7.1.2

* remove error strategy for local runs

Previously, a job that failed because of insufficient memory was
resubmitted 3 times and resource requirements were increased for
each attempt.

e.g run_predictions required:

- 2 CPUs and 6GB RAM for the first attempt
- 4 CPUs and 12GB RAM for the second attempt
- 6 CPUs and 18GB RAM for the third attempt

While such a strategy makes sense in a cluster environment, where
increased resource requests can be satisfied, it makes little sense
on a local computer with given hardware limitations.

This commit removes the error strategy for local pipeline runs.

* enable integration tests when pushing to dev

* fix display of shiny server IP on macOS

Previously, the logic assumed that `hostname -i` returns the local
ip address of the host. Apparently this is not the case on MacOS,
thus fall back to localhost on these systems.

* (attempt to) fix string conversion of uname output

* add CHANGELOG.md

* set version tags for 1.1 release

Merge pull request #32 from Gregor-Mendel-Institute/dev

Merge Dev > Master for initial release