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NEON FATES capabilities #1932

Merged
merged 44 commits into from
Feb 2, 2023
Merged

NEON FATES capabilities #1932

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88638a8
add fates-specific helper script
Jan 9, 2023
f56dabf
updating so we can create FATES surface datasets
Jan 9, 2023
a175a1b
fixing some file names
Jan 10, 2023
c392117
make executable
adrifoster Jan 10, 2023
1585d0a
remove packages check
adrifoster Jan 10, 2023
1e930bb
adding reference to new FATES surface files
adrifoster Jan 10, 2023
ee011fa
create fates-specific calls
Jan 10, 2023
f1137fd
create fates-specific calls
Jan 10, 2023
057abd1
update surface data name
adrifoster Jan 10, 2023
187ef47
change history names
adrifoster Jan 10, 2023
815ed9c
Update neon_sites_dompft.csv
wwieder Jan 11, 2023
490fd34
Update usermods shell commands
wwieder Jan 11, 2023
a374044
Update user_nl_clm
wwieder Jan 11, 2023
3141916
Update neon_sites_dompft.csv
wwieder Jan 11, 2023
c6bce1e
Update BLAN shell commands
wwieder Jan 11, 2023
09cfaa6
Update ORNL shell commands
wwieder Jan 11, 2023
dc101f3
Update UNDE shell commands
wwieder Jan 11, 2023
c366a6a
Merge branch 'wwieder-ONAQ_correction' into NEON_fates
adrifoster Jan 12, 2023
de831f7
adding new updates to FATES side
adrifoster Jan 12, 2023
3fbeeaf
add packaging to ctsm_py environment
adrifoster Jan 12, 2023
88afa24
add back pandas version check
Jan 12, 2023
3d25769
updates to surfwrapper
adrifoster Jan 20, 2023
ba597a5
add back space in subset_data
Jan 20, 2023
249b140
Merge branch 'NEON_fates' of https://github.com/adrifoster/CTSM into …
Jan 20, 2023
3f4e880
update flags
Jan 20, 2023
b26d33c
update notes
Jan 20, 2023
ab5f0c9
update file name
Jan 20, 2023
d22eb00
remove fates argument
Jan 20, 2023
207091a
add NEON test, add 1pt fates compset alias
Jan 20, 2023
02612b0
exit if trying to run KONA or STER with FATES
Jan 20, 2023
7982940
update surface file name
Jan 20, 2023
2ecd83e
Merge branch 'master' into NEON_fates
Jan 23, 2023
6198e3c
remove KONA and STER FATES usermods, add README
adrifoster Jan 23, 2023
5e768ba
Merge branch 'master' into NEON_fates
Jan 26, 2023
a1130ef
add new test to fates list
Jan 26, 2023
aad7de1
add fire_emis and fates test and check
Jan 26, 2023
435691e
update test number
Jan 26, 2023
ef82a68
add --no-megan to build-namelist test
adrifoster Jan 27, 2023
72e252a
add test to expected fails
Jan 27, 2023
47d61a6
add PRT2 test to expected fails
Feb 1, 2023
8f6c03e
add back space
Feb 1, 2023
48a38b6
update changelog
Feb 1, 2023
eb29c80
update changelog date
Feb 1, 2023
0e83df3
update changelog date
Feb 2, 2023
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Update user_nl_clm 
only needed for ONAQ, but done for all sites for consistency
  • Loading branch information
@wwieder
wwieder authored Jan 11, 2023
commit a374044a1a7cf191e53aae876cc9274332d13606
2 changes: 1 addition & 1 deletion cime_config/usermods_dirs/NEON/defaults/user_nl_clm
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Expand Up @@ -19,7 +19,7 @@
!----------------------------------------------------------------------------------

flanduse_timeseries = ' ' ! This isn't needed for a non transient case, but will be once we start using transient compsets
fsurdat = "$DIN_LOC_ROOT/lnd/clm2/surfdata_map/NEON/surfdata_1x1_NEON_${NEONSITE}_hist_78pfts_CMIP6_simyr2000_c221111.nc"
fsurdat = "$DIN_LOC_ROOT/lnd/clm2/surfdata_map/NEON/surfdata_1x1_NEON_${NEONSITE}_hist_78pfts_CMIP6_simyr2000_c230111.nc"

stream_fldfilename_lightng = '$DIN_LOC_ROOT/atm/datm7/NASA_LIS/clmforc.Li_2016_climo1995-2013.360x720.lnfm_Total_NEONarea_c210625.nc'
stream_meshfile_lightng = '$DIN_LOC_ROOT/atm/datm7/NASA_LIS/ESMF_MESH.Li_2016.360x720.NEONarea_cdf5_c221104.nc'
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