Created
June 19, 2014 03:00
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Install the Python scientific stack (a.k.a. the Scipy Superpack) via Brew and pip
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| #!/bin/sh | |
| hash brew &> /dev/null | |
| if [ $? -eq 1 ]; then | |
| echo 'Installing Homebrew ...' | |
| ruby -e "$(curl -fsSL https://raw.github.com/Homebrew/homebrew/go/install)" | |
| fi | |
| # Ensure Homebrew formulae are updated | |
| brew update | |
| hash git &> /dev/null | |
| if [ $? -eq 1 ]; then | |
| echo 'Installing Git ...' | |
| brew install git | |
| fi | |
| hash gcc &> /dev/null | |
| if [ $? -eq 1 ]; then | |
| echo 'No gcc detected; Installing XCode Command Line Tools ...' | |
| xcode-select --install | |
| fi | |
| # Add science tap | |
| brew tap homebrew/science | |
| # Python tools and utilities | |
| brew install python | |
| brew install gfortran | |
| pip install nose | |
| pip install six | |
| pip install patsy | |
| pip install pygments | |
| pip install sphinx | |
| pip install cython | |
| # IPython | |
| brew install zeromq | |
| pip install jinja2 | |
| pip install tornado | |
| pip install pyzmq | |
| pip install ipython | |
| # OpenBLAS for NumPy/SciPy | |
| brew install openblas | |
| export BLAS=/usr/local/opt/openblas/lib/libopenblas.a | |
| export LAPACK=/usr/local/opt/openblas/lib/libopenblas.a | |
| # Build from cloned repo to avoid SciPy build issue | |
| git clone git@github.com:numpy/numpy.git numpy_temp | |
| cd numpy_temp | |
| python setupegg.py bdist_egg | |
| easy_install dist/*egg | |
| cd .. | |
| rm -rf numpy_temp | |
| # SciPy | |
| pip install git+git://github.com/scipy/scipy#egg=scipy-dev | |
| # Matplotlib | |
| brew install freetype | |
| pip install git+git://github.com/matplotlib/matplotlib.git | |
| # Rest of the stack | |
| pip install git+git://github.com/pydata/pandas.git | |
| pip install git+git://github.com/scikit-learn/scikit-learn.git | |
| pip install git+git://github.com/pymc-devs/pymc.git@2.3 | |
| pip install git+git://github.com/statsmodels/statsmodels.git | |
| pip install git+git://github.com/Theano/Theano.git |
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