Abstract
A recessive form of severe osteogenesis imperfecta that is not caused by mutations in type I collagen has long been suspected. Mutations in human CRTAP (cartilage-associated protein) causing recessive bone disease have been reported. CRTAP forms a complex with cyclophilin B and prolyl 3-hydroxylase 1, which is encoded by LEPRE1 and hydroxylates one residue in type I collagen, α1(I)Pro986. We present the first five cases of a new recessive bone disorder resulting from null LEPRE1 alleles; its phenotype overlaps with lethal/severe osteogenesis imperfecta but has distinctive features. Furthermore, a mutant allele from West Africa, also found in African Americans, occurs in four of five cases. All proband LEPRE1 mutations led to premature termination codons and minimal mRNA and protein. Proband collagen had minimal 3-hydroxylation of α1(I)Pro986 but excess lysyl hydroxylation and glycosylation along the collagen helix. Proband collagen secretion was moderately delayed, but total collagen secretion was increased. Prolyl 3-hydroxylase 1 is therefore crucial for bone development and collagen helix formation.
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26 June 2008
In the version of this article initially published, the nucleotide positions of the mutations in the LEPRE1 cDNA and genomic DNA sequence in Table 1, Supplementary Table 1 and Supplementary Figure 1 were incorrectly numbered relative to the first nucleotide of exon 1 rather than the first nucleotide of the LEPRE1 start codon. These errors have been corrected in the HTML and PDF versions of the article.
References
Byers, P.H. & Cole, W.G. Osteogenesis imperfecta. in Connective Tissue and Its Heritable Disorders (eds. Royce, P.M. & Steinmann, B.) 385–430 (Wiley-Liss, Inc., New York, 2002).
Marini, J.C. Osteogenesis imperfecta. in Nelson Textbook of Pediatrics 17th ed. (eds. Behrman, R.E., Kliegman, R.M. & Jenson, H.B.) 2336–2338 (Saunders, Philadelphia, 2004).
Sillence, D.O., Senn, A. & Danks, D.M. Genetic heterogeneity in osteogenesis imperfecta. J. Med. Genet. 16, 101–116 (1979).
Aitchison, K., Ogilvie, D., Honeyman, M., Thompson, E. & Sykes, B. Homozygous osteogenesis imperfecta unlinked to collagen I genes. Hum. Genet. 78, 233–236 (1988).
Wallis, G.A. et al. Osteogenesis imperfecta type III: mutations in the type I collagen structural genes, COL1A1 and COL1A2, are not necessarily responsible. J. Med. Genet. 30, 492–496 (1993).
Daw, S.C., Nicholls, A.C., Williams, M., Sykes, B. & Pope, F.M. Autosomal recessive Osteogenesis imperfecta. Excess post translational modification of collagen not linked to either COL1A1 or COL1A2. J. Med. Genet. 25, 275 (1988).
Wassenhove-McCarthy, D.J. & McCarthy, K.J. Molecular characterization of a novel basement membrane-associated proteoglycan, leprecan. J. Biol. Chem. 274, 25004–25017 (1999).
Kaul, S.C., Sugihara, T., Yoshida, A., Nomura, H. & Wadhwa, R. Gros1, a potential growth suppressor on chromosome 1: its identity to basement membrane-associated proteoglycan, leprecan. Oncogene 19, 3576–3583 (2000).
Vranka, J.A., Sakai, L.Y. & Bachinger, H.P. Prolyl 3-hydroxylase 1, enzyme characterization and identification of a novel family of enzymes. J. Biol. Chem. 279, 23615–23621 (2004).
Morello, R. et al. CRTAP is required for prolyl 3-hydroxylation and mutations cause recessive osteogenesis imperfecta. Cell 127, 291–304 (2006).
Myllyharju, J. & Kivirikko, K.I. Collagens, modifying enzymes and their mutations in humans, flies and worms. Trends Genet. 20, 33–43 (2004).
Raghunath, M., Bruckner, P. & Steinmann, B. Delayed triple helix formation of mutant collagen from patients with osteogenesis imperfecta. J. Mol. Biol. 236, 940–949 (1994).
Fietzek, P.P., Rexrodt, F.W., Wendt, P., Stark, M. & Kuhn, K. The covalent structure of collagen. Amino-acid sequence of peptide 1–CB6-C2. Eur. J. Biochem. 30, 163–168 (1972).
Tryggvason, K., Majamaa, K., Risteli, J. & Kivirikko, K.I. Partial purification and characterization of chick-embryo prolyl 3-hydroxylase. Biochem. J. 183, 303–307 (1979).
Labuda, M. et al. Osteogenesis imperfecta type VII maps to the short arm of chromosome 3. Bone 31, 19–25 (2002).
Tonachini, L. et al. cDNA cloning, characterization and chromosome mapping of the gene encoding human cartilage associated protein (CRTAP). Cytogenet. Cell Genet. 87, 191–194 (1999).
Ward, L.M. et al. Osteogenesis imperfecta type VII: an autosomal recessive form of brittle bone disease. Bone 31, 12–18 (2002).
Barnes, A.M. et al. Deficiency of cartilage-associated protein in recessive lethal osteogenesis imperfecta. N. Engl. J. Med. 355, 2757–2764 (2006).
Noensie, E.N. & Dietz, H.C. A strategy for disease gene identification through nonsense-mediated mRNA decay inhibition. Nat. Biotechnol. 19, 434–439 (2001).
Jarnum, S. et al. LEPREL1, a novel ER and Golgi resident member of the Leprecan family. Biochem. Biophys. Res. Commun. 317, 342–351 (2004).
Torre-Blanco, A. et al. Temperature-induced post-translational over-modification of type I procollagen. Effects of over-modification of the protein on the rate of cleavage by procollagen N-proteinase and on self-assembly of collagen into fibrils. J. Biol. Chem. 267, 2650–2655 (1992).
Jenkins, C.L., Bretscher, L.E., Guzei, I.A. & Raines, R.T. Effect of 3-hydroxyproline residues on collagen stability. J. Am. Chem. Soc. 125, 6422–6427 (2003).
Mizuno, K., Hayashi, T., Peyton, D.H. & Bachinger, H.P. The peptides acetyl-(Gly-3(S)Hyp-4(R)Hyp)10–NH2 and acetyl-(Gly-Pro-3(S)Hyp)10–NH2 do not form a collagen triple helix. J. Biol. Chem. 279, 282–287 (2004).
Schumacher, M.A., Mizuno, K. & Bachinger, H.P. The crystal structure of a collagen-like polypeptide with 3(S)-hydroxyproline residues in the Xaa position forms a standard 7/2 collagen triple helix. J. Biol. Chem. 281, 27566–27574 (2006).
Royce, P.M. & Barnes, M.J. Failure of highly purified lysyl hydroxylase to hydroxylate lysyl residues in the non-helical regions of collagen. Biochem. J. 230, 475–480 (1985).
Wang, C. et al. The third activity for lysyl hydroxylase 3: galactosylation of hydroxylysyl residues in collagens in vitro. Matrix Biol. 21, 559–566 (2002).
Wu, J. et al. Functional diversity of lysyl hydroxylase 2 in collagen synthesis of human dermal fibroblasts. Exp. Cell Res. 312, 3485–3494 (2006).
Kefalides, N.A. Structure and biosynthesis of basement membranes. Int. Rev. Connect. Tissue Res. 6, 63–104 (1973).
Cabral, W.A. et al. Type I collagen triplet duplication mutation in lethal osteogenesis imperfecta shifts register of alpha chains throughout the helix and disrupts incorporation of mutant helices into fibrils and extracellular matrix. J. Biol. Chem. 278, 10006–10012 (2003).
Forlino, A. et al. Phenotypic comparison of an osteogenesis imperfecta type IV proband with a de novo alpha2(I) Gly922 → Ser substitution in type I collagen and an unrelated patient with an identical mutation. Biochem. Mol. Med. 62, 26–35 (1997).
Acknowledgements
We thank the families of the probands for their commitment to and long-term support of our research. W.A.C. is a graduate student in the Molecular and Cell Biology Program of the University of Maryland. A. Galicka performed preliminary collagen cDNA sequencing and Q. Wang conducted prior collagen electrophoretic studies on probands 2 and 4. We thank the clinical teams that have provided care for the probands and their families, including L. Vera and M. France for proband 1, E. Carson, H. Stern, J. Larson and J. Fonda for proband 2, and T. Markello and L. Tosi for proband 3. D.R.E. acknowledges grant support from US National Institutes of Health AR37318 and HD 22657.
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W.A.C., W.C., A.M.B. were responsible for the design and execution of all experiments except for the differential scanning calorimetry (E.M. and N.V.K., under the guidance of S.L.) and mass spectrometry (M.A.W. and M.A.S., under the guidance of D.R.E.). K.N.R., C.J.T., D.I.B., C.K. and P.A.S. referred the probands to J.C.M. and contributed syndrome description and clinical insights. The manuscript was primarily written by J.C.M., with contributions from W.A.C. and critical revisions from W.C., A.M.B., D.R.E. and S.L. J.C.M. was responsible for overall study strategy and design, and clinical insight in selection of cases to be screened.
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Supplementary information
Supplementary Fig. 1
LEPRE1 mutations in severe recessive osteogenesis imperfecta. (PDF 143 kb)
Supplementary Fig. 2
Identification of leprecan in the extracellular matrix of murine bone. (PDF 42 kb)
Supplementary Table 1
PCR primers for mutation analysis and transcript structure determination. (PDF 24 kb)
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Cabral, W., Chang, W., Barnes, A. et al. Prolyl 3-hydroxylase 1 deficiency causes a recessive metabolic bone disorder resembling lethal/severe osteogenesis imperfecta. Nat Genet 39, 359–365 (2007). https://doi.org/10.1038/ng1968
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DOI: https://doi.org/10.1038/ng1968