Skip to main content
Log in

Arabidopsis thaliana cor15b, an apparent homologue of cor15a, is strongly responsive to cold and ABA, but not drought

  • Short Communication
  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

We previously described a cold-regulated (cor) gene from Arabidopsis thaliana, cor15a (formerly cor15), that encodes a 15 kDa polypeptide that is targeted to chloroplasts (C. Lin and M. Thomashow, Plant Physiol 99 (1992): 519–525). Here we describe an apparent homologue of cor15a, cor15b. cor15b is located immediately downstream from cor15a (within 1 kb) and has the same relative 5′ to 3′ orientation as cor15a. The predicted coding regions for the two genes are 82% identical at the nucleic acid sequence level. Transcripts for cor15b, like those of cor15a, increase dramatically in response to low temperature and exogenous application of ABA. However, only cor15a transcripts accumulate to high levels in response to drought. The cor15a/cor15b gene pair is the third case in which A. thaliana cold-regulated genes have been found to exist as tandem gene pairs with the members of each pair being differentially regulated.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Price includes VAT (Canada)

Instant access to the full article PDF.

References

  1. Altschul, AF, Gish, W, Miller, W, Myers, EW, Lipman, DJ: Basic local alignment search tool. J Mol Biol 215: 403–410 (1990).

    Article  PubMed  Google Scholar 

  2. Baker SS: Cloning, identification and characterization of fertilization associated genes in Pinus strobus (L.) ovules. Ph. D. thesis, Ohio Sate University (1990).

  3. DureIII, L, Crouch, M, Harada, J, Ho, T-HD, Mundy, J, Quatrano, R, Thomas, T, Sung, ZR: Common amino acid sequence domains among the LEA proteins of higher plants. Plant Mol Biol 12: 475–486 (1989).

    Google Scholar 

  4. Gavel, Y, vonHeijne, G: A conserved cleavage-site motif in chloroplast transit peptides. FEBS Lett 261: 455–458 (1990).

    Article  PubMed  Google Scholar 

  5. Gilmour, SJ, Artus, NN, Thomashow, MF: cDNA sequence analysis and expression of two cold-regulated genes of Arabidopsis thaliana. Plant Mol Biol 18: 13–21 (1992).

    PubMed  Google Scholar 

  6. Gilmour, SJ, Hajela, RK, Thomashow, MF: Cold acclimation in Arabidopsis thaliana. Plant Physiol 87: 745–750 (1988).

    Google Scholar 

  7. Gilmour, SJ, Thomashow, MF: Cold acclimation and cold-regulated gene expression in ABA mutants of Arabidopsis thaliana. Plant Mol Biol 17: 1233–1240 (1991).

    PubMed  Google Scholar 

  8. Guerrero, FD, Jones, JT, Mullet, JE: Turgor-responsive gene transcription and RNA levels increase rapidly when pea shoots are wilted. Sequence and expression of three inducible genes. Plant Mol Biol 15: 11–26 (1990).

    PubMed  Google Scholar 

  9. Guiltinan, MJ, Marcotte, WR, Quatrano, RS: A plant leucine zipper protein that recognizes an abscisic acid response element. Science 250: 267–271 (1990).

    PubMed  Google Scholar 

  10. Guy, CL: Cold acclimation and freezing stress tolerance: role of protein metabolism. Annu Rev Plant Physiol Plant Mol Biol 41: 187–223 (1990).

    Google Scholar 

  11. Hajela, RK, Horvath, DP, Gilmour, SJ, Thomashow, MF: Molecular cloning and expression of cor (cold-regulated) genes in Arabidopsis thaliana. Plant Physiol 93: 1246–1252 (1990).

    Google Scholar 

  12. Hartung, W, Davies, WJ: Drought-induced changes in physiology and ABA. In: Davies, JW, Jones, HG (eds) Abscisic Acid: Physiology and Biochemistry, pp. 63–79. BIOS Scientific Publishers. Oxford (1991).

    Google Scholar 

  13. Horvath DP, McLarney BK, Thomashow MF: Regulation of Arabidopsis thaliana L. (Heyn) cor78 in response to low temperature. Plant Physiol (in press).

  14. Joshi, CP: An inspection of the domain between putative TATA box and translation start site in 79 plant genes. Nucl Acids Res 15: 6643–6653 (1987).

    PubMed  Google Scholar 

  15. Kurkela, S, Borg-Franck, M. Structure and expression of kin2, one of two cold- and ABA-induced genes of Arabidopsis thaliana. Plant Mol Biol 19: 689–692 (1992).

    Article  PubMed  Google Scholar 

  16. Kurkela, S, Franck, M: Cloning and characterization of a cold- and ABA-inducible Arabidopsis gene. Plant Mol Biol 15: 137–144 (1990).

    PubMed  Google Scholar 

  17. Kyte, J, Doolittle, RF: A simple method for displaying the hydropathic character of a protein. J Mol Biol 157: 105–132 (1982).

    PubMed  Google Scholar 

  18. Lang, V, Palva, ET: The expression of a rab-related gene, rab18, is induced by abscisic acid during the cold acclimation process of Arabidopsis thaliana (L.) Heynh. Plant Mol Biol 20: 951–962 (1992).

    PubMed  Google Scholar 

  19. Lin, C, Thomashow, MF: DNA Sequence analysis of a complementary DNA for cold-regulated. Arabidopsis gene cor15 and characterization of the COR15 polypeptide. Plant Physiol 99 519–525 (1992).

    Google Scholar 

  20. Nordin, K, Heino, P, Palva, ET: Separate signal pathways regulate the expression of a low-temperature-induced gene in Arabidopsis thaliana (L.) Heynh. Plant Mol Biol 16: 1061–1071 (1991).

    PubMed  Google Scholar 

  21. Nordin, K, Vahala, T, Palva, ET: Differential expression of two related, low-temperature-induced genes in Arabidopsis thaliana (L.) Heynh. Plant Mol Biol 21: 641–653 (1993).

    PubMed  Google Scholar 

  22. Sambrook, J, Fritsch, EF, Maniatis, T: Molecular Cloning: A laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1989).

    Google Scholar 

  23. Sanger, F, Nicklen, S, Coulson, AR: DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467 (1977).

    PubMed  Google Scholar 

  24. Soll, J, Alefsen, H: The protein import apparatus of chloroplasts. Physiol Plant 87: 433–440 (1993).

    Article  Google Scholar 

  25. Thomashow, MF: Molecular genetics of cold acclimation in higher plants. Adv Genet 28: 99–131 (1990).

    Google Scholar 

  26. Thomashow, MF: Genes induced during cold acclimation in higher plants. In: Steponkus, PL (ed) Advances in Low-Temperature Biology, vol 2. pp. 183–210. JAI Press Ltd., London (1993).

    Google Scholar 

  27. Williams, ME, Foster, R, Chua, NH: Sequences flanking the hexameric G-box core CACGTG affect the specificity of protein binding. Plant Cell 4: 485–496 (1992).

    Article  PubMed  Google Scholar 

  28. Yamaguchi-Shinozaki, K, Shinozaki, K: Characterization of the expression of a desiccation-responsive rd29 gene of Arabidopsis thaliana and analysis of its promoter in transgenic plants. Mol Gen Genet 236: 331–340 (1993).

    Article  PubMed  Google Scholar 

  29. Zeff, RA, Geier, SS, Natherson, SG: Molecular loss variants of the murine major histocompatibility complex: nonexpression of H-2K antigen associated with marked reduction in H-2K mRNA as determined by oligonucleotide hybridization analysis. Immunology 137: 1366–1370 (1986).

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Wilhelm, K.S., Thomashow, M.F. Arabidopsis thaliana cor15b, an apparent homologue of cor15a, is strongly responsive to cold and ABA, but not drought. Plant Mol Biol 23, 1073–1077 (1993). https://doi.org/10.1007/BF00021822

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00021822

Key words