Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.4   7480481   oxygen-evolving enhancer protein 1, chloroplastic 
 ppo-r.3   7480481   oxygen-evolving enhancer protein 1, chloroplastic 
 ppo-m.4   7480481   oxygen-evolving enhancer protein 1, chloroplastic 
 ppo-u.4   7473131   oxygen-evolving enhancer protein 1, chloroplastic 
 gma-u.4   100798485   oxygen-evolving enhancer protein 1, chloroplastic-like 
 gma-u.4   100792252   oxygen-evolving enhancer protein 1, chloroplastic 
 gma-u.4   100820458   oxygen-evolving enhancer protein 1, chloroplastic-like 
 mtr-u.4   25501656   oxygen-evolving enhancer protein 1, chloroplastic 
 mtr-u.4   11405827   oxygen-evolving enhancer protein 1, chloroplastic 
 ath-u.4   PSBO2   photosystem II subunit O-2 
 ath-u.4   PSBO1   PS II oxygen-evolving complex 1 
 sly-u.4   OEE1   oxygen-evolving enhancer protein 1, chloroplastic 
 osa-u.4   4324479   oxygen-evolving enhancer protein 1, chloroplastic 

close


Top 50 coexpressed genes to 7480481 (ppo-u.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 pop195   Photosynthesis  20 89 35.80
 pop196   Photosynthesis - antenna proteins  16 25 37.62
 pop860   Porphyrin metabolism  3 59 3.57
 pop900   Terpenoid backbone biosynthesis  2 67 2.05

close


ppo:LOC7480481 (oxygen-evolving enhancer protein 1, chloroplastic) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.4
for
7480481
ppo-r.3
for
7480481
ppo-m.4
for
7480481
ppo-u.4
for
7473131
gma-u.4
for
100798485
gma-u.4
for
100792252
gma-u.4
for
100820458
mtr-u.4
for
25501656
mtr-u.4
for
11405827
ath-u.4
for
PSBO2
ath-u.4
for
PSBO1
sly-u.4
for
OEE1
osa-u.4
for
4324479
1 LOC7477808 photosystem I reaction center subunit III, chloroplastic 7477808 POPTR_001G081500v3 14.3 9.5
 12.4
 11.0
 9.3
 6.2
 11.5
 9.4
 3.2
 7.2
 18.6
 11.8
8.6
 14.3
2 LOC7473131 oxygen-evolving enhancer protein 1, chloroplastic 7473131 POPTR_007G033700v3 13.7 8.5
 12.4
 13.7
 12.6
7.3
 12.2
8.8
 12.6
8.8
 3.9
 3.9
 10.8
 10.8

3 LOC7478401 photosystem I reaction center subunit VI, chloroplastic 7478401 POPTR_003G052500v3 13.6 11.0
 9.8
 12.2
 8.5
8.0
 8.3
7.7
 7.9
7.3
 10.2
 4.0
 8.8
8.7
 13.6
9.5
 6.8
4.5
 13.0
4 LOC7487313 chlorophyll a-b binding protein CP29.2, chloroplastic 7487313 POPTR_006G099500v3 13.2 14.1
 6.2
 11.6
11.0
 6.9
6.7
 8.7
8.4
 9.0
8.9
 4.9
4.6
 3.8
2.4
 8.8
6.5
 18.2
10.4
 10.5
 11.1
5 LOC7467482 photosystem I reaction center subunit II, chloroplastic 7467482 POPTR_008G151600v3 12.9 10.0
 9.6
 12.0
9.1
 10.2
8.7
 8.1
6.6
 11.5
10.2
 6.5
 4.0
 9.0
7.6
 14.5
8.3
 11.4
 6.4
6 LOC7474216 photosystem I reaction center subunit II, chloroplastic 7474216 POPTR_010G089400v3 12.7 10.0
 9.4
 12.0
9.1
 10.2
8.7
 8.1
6.6
 11.5
10.2
 6.5
 4.0
 9.0
7.6
 14.5
8.3
 11.4
 6.4
7 LOC7480710 oxygen-evolving enhancer protein 2, chloroplastic 7480710 POPTR_002G055700v3 12.2 9.2
 9.4
 12.9
11.4
 9.5
7.7
 8.1
7.8
 13.8
9.0
 6.5
4.0
 4.2
3.6
 9.8
 22.1
 11.8
 15.3
8 LOC7471200 photosystem I reaction center subunit IV A, chloroplastic 7471200 POPTR_002G253800v3 11.8 8.7
 9.4
 12.3
 9.0
8.3
 8.0
7.1
 9.6
7.3
 6.9
6.8
 5.0
3.2
 8.4
6.5
 15.8
14.3
 9.0
5.7
 10.3
9 LOC7464819 oxygen-evolving enhancer protein 2, chloroplastic 7464819 POPTR_005G206700v3 11.5 7.5
 10.0
 12.9
11.4
 9.5
7.7
 8.1
7.8
 13.8
9.0
 6.5
4.0
 4.2
3.6
 9.8
 22.1
 11.8
 15.3
10 LOC7463368 photosystem I reaction center subunit XI, chloroplastic 7463368 POPTR_014G175600v3 11.4 8.1
 9.3
 10.7
3.1
 10.0
7.8
 7.5
7.0
 10.7
8.2
 7.0
 7.4
 9.3
 17.3
 14.2
11.6
 4.5
11 LOC7495298 oxygen-evolving enhancer protein 3-2, chloroplastic 7495298 POPTR_011G031300v3 11.3 10.2
 7.1
 9.9
9.7
 9.5
7.3
 7.8
7.8
 10.5
8.0
 6.2
 4.9
 10.1
8.6
 15.2
11.9
 13.7
 11.5
12 LOC7489858 chlorophyll a-b binding protein 5, chloroplastic 7489858 POPTR_002G221400v3 10.8 7.5
 9.0
 10.1
8.5
 7.3
6.5
 9.6
8.6
 8.1
7.8
 5.3
3.5
 4.2
3.3
 6.6
6.3
 12.7
8.7
 6.9
6.7
 8.4
8.3
13 LOC7497381 protochlorophyllide reductase 7497381 POPTR_013G135500v3 10.7 6.7
 9.7
 11.0
5.5
 6.5
3.5
 8.4
3.8
 9.0
5.2
 5.4
 2.7
 6.3
3.4
 5.1
3.9
 6.6
4.2
 7.8
5.9
14 LOC7458654 chlorophyll a-b binding protein 6, chloroplastic 7458654 POPTR_010G221100v3 10.7 7.3
 9.0
 9.9
1.4
 7.1
5.4
 8.7
7.0
 8.4
7.2
 3.8
 1.3
 7.6
 14.3
 7.6
5.4
 10.7
15 LOC7469352 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic 7469352 POPTR_014G172400v3 10.4 9.0
 6.9
 9.4
 13.1
11.1
 9.0
7.6
 12.0
11.1
 4.0
 3.6
 8.3
 17.8
 8.9
3.7
 9.1
16 LOC7491998 uncharacterized LOC7491998 7491998 POPTR_006G222300v3 9.9 7.8
 7.4
 7.8
7.0
 10.1
9.2
 9.6
8.8
 12.7
10.2
 6.1
2.6
 3.6
3.2
 7.2
 14.9
 8.0
7.0
 5.8
17 LOC7473011 chlorophyll a-b binding protein CP24 10A, chloroplastic 7473011 POPTR_001G210000v3 9.9 8.5
 6.6
 7.8
6.6
 7.7
7.0
 9.5
8.3
 10.7
10.3
 4.1
 2.8
 8.6
 13.7
 6.9
6.5
 6.3
18 LOC7457672 photosystem I reaction center subunit V, chloroplastic 7457672 POPTR_001G471900v3 9.8 8.8
 6.3
 8.9
7.2
 7.8
7.2
 7.8
6.2
 8.3
6.8
 4.5
 3.4
 5.6
 14.9
 5.8
 10.2
19 LOC7466067 chlorophyll a-b binding protein CP29.2, chloroplastic 7466067 POPTR_016G115200v3 9.7 7.5
 7.4
 11.6
11.0
 6.9
6.7
 8.7
8.4
 9.0
8.9
 4.9
4.6
 3.8
2.4
 8.8
6.5
 18.2
10.4
 10.5
 11.1
20 LOC7493970 chlorophyll a-b binding protein of LHCII type 1 7493970 POPTR_005G239200v3 9.7 7.9
 6.9
 10.1
8.5
 7.3
6.5
 9.6
8.6
 8.1
7.8
 5.3
3.5
 4.2
3.3
 6.6
6.3
 12.7
8.7
 6.9
6.7
 8.4
8.3
21 LOC7484745 geranylgeranyl diphosphate reductase, chloroplastic 7484745 POPTR_T161200v3 9.3 9.6
 4.7
 6.7
6.0
 6.6
5.9
 6.2
5.9
 7.2
6.4
 2.5
0.4
 2.3
-0.9
 5.8
 10.2
 5.8
0.1
 7.2
-0.1
22 LOC7496895 plastocyanin B, chloroplastic 7496895 POPTR_002G016000v3 9.1 7.8
 6.1
 7.8
6.0
 8.7
7.7
 6.1
5.4
 10.2
10.0
 7.1
 4.5
 9.3
7.3
 15.2
6.2
 8.4
 9.8
23 LOC7480941 photosystem II core complex proteins psbY, chloroplastic 7480941 POPTR_008G181900v3 8.9 6.9
 6.7
 8.5
7.1
 9.8
5.5
 6.9
5.8
 10.1
6.4
 7.1
2.6
 6.3
2.2
 10.1
 13.6
 7.8
 8.8
24 LOC7469591 tetrapyrrole-binding protein, chloroplastic 7469591 POPTR_007G128200v3 8.9 8.2
 5.5
 6.9
2.9
 4.9
3.9
 4.0
3.8
 6.5
5.1
 2.6
 1.7

5.9
 3.3
25 LOC7490773 oxygen-evolving enhancer protein 3, chloroplastic 7490773 POPTR_004G031500v3 8.9 6.3
 7.3
 9.9
9.7
 9.5
7.3
 7.8
7.8
 10.5
8.0
 6.2
 4.9
 10.1
8.6
 15.2
11.9
 13.7
 11.5
26 LOC7493971 chlorophyll a-b binding protein of LHCII type 1 7493971 POPTR_005G239300v3 8.8 6.3
 7.2
 10.1
8.5
 7.3
6.5
 9.6
8.6
 8.1
7.8
 5.3
3.5
 4.2
3.3
 6.6
6.3
 12.7
8.7
 6.9
6.7
 8.4
8.3
27 LOC7471832 chlorophyll a-b binding protein of LHCII type 1 7471832 POPTR_011G079500v3 8.8 7.0
 6.4
 10.1
8.5
 7.3
6.5
 9.6
8.6
 8.1
7.8
 5.3
3.5
 4.2
3.3
 6.6
6.3
 12.7
8.7
 6.9
6.7
 8.4
8.3
28 LOC7466740 photosystem I reaction center subunit N, chloroplastic 7466740 POPTR_007G105900v3 8.8 5.7
 7.8
 8.5
6.9
 7.2
6.6
 7.2
7.0
 9.0
6.4
 5.9
 3.6
 8.9
 12.8
 8.5
 10.1
29 LOC7454940 uncharacterized LOC7454940 7454940 POPTR_006G087700v3 8.7 9.0
 4.3
 7.5
 5.6
2.8
 3.7
2.7
 3.9
3.7
 4.6
 3.6
 4.3
 6.0
 2.1
 3.5
30 LOC7455996 chlorophyll a-b binding protein 151, chloroplastic 7455996 POPTR_014G165100v3 8.7 6.7
 6.6
 10.1
8.5
 7.3
6.5
 9.6
8.6
 8.1
7.8
 5.3
3.5
 4.2
3.3
 6.6
6.3
 12.7
8.7
 6.9
6.7
 8.4
8.3
31 LOC18105790 chlorophyll a-b binding protein 4, chloroplastic 18105790 POPTR_015G062200v3 8.5 9.5
6.5
 8.0
6.9
 11.2
9.4
 11.4
10.2
 6.5
 1.9
 6.2
 12.2
 6.9
3.3
 10.2
32 LOC7460727 photosystem II core complex proteins psbY, chloroplastic 7460727 POPTR_010G052000v3 8.5 6.3
 6.7
 8.5
7.1
 9.8
5.5
 6.9
5.8
 10.1
6.4
 7.1
2.6
 6.3
2.2
 10.1
 13.6
 7.8
 8.8
33 LOC7496570 chlorophyll a-b binding protein 7, chloroplastic 7496570 POPTR_003G171500v3 8.5 8.8
 4.2
 9.4
7.2
 7.6
6.7
 8.7
8.0
 11.0
8.8
 5.6
 3.1
 9.4
 17.0
 8.8
 6.3
34 LOC7481401 calvin cycle protein CP12-1, chloroplastic 7481401 POPTR_002G196100v3 8.4 5.9
 7.0
 7.2
1.4
 5.7
5.6
 5.3
4.5
 5.7
4.8
 6.6
2.0
 4.5
2.1
 4.4
2.9
 7.8
0.8
 2.7
2.5
 5.0
3.0
35 LOC7482788 chlorophyll a-b binding protein 7, chloroplastic 7482788 POPTR_001G056700v3 8.2 5.2
 7.4
 9.4
7.2
 7.6
6.7
 8.7
8.0
 11.0
8.8
 5.6
 3.1
 9.4
 17.0
 8.8
 6.3
36 LOC18108360 chlorophyll a-b binding protein CP26, chloroplastic 18108360 POPTR_019G063100v3 8.1 9.0
6.3
5.9
 7.8
6.7
 8.1
7.3
 8.9
7.3
 3.4
 3.4
 7.0
 15.6
 9.6
 7.1
37 LOC7465087 protein plastid transcriptionally active 16, chloroplastic 7465087 POPTR_001G244800v3 8.1 6.7
 5.7
 6.2
4.9
 5.8
4.8
 6.2
6.1
 6.1
5.6
 3.4
 4.6
 9.0
 9.7
 7.6
 3.7
38 LOC7455368 protein CURVATURE THYLAKOID 1B, chloroplastic 7455368 POPTR_014G106400v3 8.0 5.0
 7.3
 7.1
3.4
 4.7
3.7
 5.3
3.1
 5.5
3.6
 3.5
0.6
 3.5
2.0
 8.1
 12.1
 6.5
 5.3
1.9
39 LOC112323653 geranylgeranyl diphosphate reductase, chloroplastic-like 112323653 POPTR_012G068800v3 8.0 9.1
6.7
6.0
 6.6
5.9
 6.2
5.9
 7.2
6.4
 2.5
0.4
 2.3
-0.9
 5.8
 10.2
 5.8
0.1
 7.2
-0.1
40 LOC18100358 uncharacterized LOC18100358 18100358 POPTR_006G144000v3 7.9 8.5
7.8
7.0
 10.1
9.2
 9.6
8.8
 12.7
10.2
 6.1
2.6
 3.6
3.2
 7.2
 14.9
 8.0
7.0
 5.8
41 LOC7498162 cytochrome b6-f complex iron-sulfur subunit, chloroplastic 7498162 POPTR_019G118500v3 7.8 6.6
 5.3
 6.3
2.0
 5.9
5.7
 5.7
3.8
 5.3
5.2
 5.6
 3.4
 7.3
 12.6
 8.4
 6.0
42 LOC7497062 transcription termination factor MTEF1, chloroplastic 7497062 POPTR_011G081400v3 7.7 5.4
 6.4
 6.9
0.2
 6.3
5.2
 4.1
3.6
 6.8
5.7
 3.9
-0.2
 4.2
-0.1
 4.5
1.0
 2.4
-0.4
 2.5
-0.2
 -0.4
43 LOC18095071 photosystem II 5 kDa protein, chloroplastic 18095071 POPTR_001G256900v3 7.7 8.1
7.7
3.3
 5.2
4.9
 4.7
4.6
 6.0
6.0
 5.3
4.4
 6.0
4.4
 8.8
 13.1
 2.0
 9.3
44 LOC7471593 photosystem I reaction center subunit psaK, chloroplastic 7471593 POPTR_006G254200v3 7.4 5.3
 6.0
 6.2
4.6
 7.7
5.7
 7.5
7.2
 12.2
8.2
 5.7
 2.7
 8.3
 15.5
 12.0
 11.5
45 LOC7466843 photosystem I reaction center subunit N, chloroplastic 7466843 POPTR_005G063300v3 7.4 6.1
 5.2
 8.5
6.9
 7.2
6.6
 7.2
7.0
 9.0
6.4
 5.9
 3.6
 8.9
 12.8
 8.5
 10.1
46 LOC7479997 photosystem II reaction center W protein, chloroplastic 7479997 POPTR_002G044300v3 7.4 5.8
 5.4
 7.4
5.9
 9.4
8.3
 10.1
8.8
 11.5
11.3
 7.4
2.4
 3.7
1.8
 8.3
 14.7
 7.9
6.6
 5.5
5.0
47 LOC18107703 uncharacterized LOC18107703 18107703 POPTR_018G065200v3 7.3 8.0
7.8
7.0
 10.1
9.2
 9.6
8.8
 12.7
10.2
 6.1
2.6
 3.6
3.2
 7.2
 14.9
 8.0
7.0
 5.8
48 LOC7480776 chlorophyll a-b binding protein CP24 10A, chloroplastic 7480776 POPTR_003G020400v3 7.2 5.2
 5.9
 7.8
6.6
 7.7
7.0
 9.5
8.3
 10.7
10.3
 4.1
 2.8
 8.6
 13.7
 6.9
6.5
 6.3
49 LOC7480891 31 kDa ribonucleoprotein, chloroplastic 7480891 POPTR_008G172100v3 7.2 6.7
 4.4
 6.5
2.5
 5.0
2.2
 5.5
3.2
 6.2
2.7
 3.6
 5.5
 2.6
 2.7
 5.0
 3.1
50 LOC112325791 chlorophyll a-b binding protein CP26, chloroplastic 112325791 POPTR_T099400v3 7.2 8.0
6.3
5.9
 7.8
6.7
 8.1
7.3
 8.9
7.3
 3.4
 3.4
 7.0
 15.6
 9.6
 7.1
The preparation time of this page was 1.1 [sec].