Evolution of DUX gene macrosatellites in placental mammals
- PMID: 22903800
- DOI: 10.1007/s00412-012-0380-y
Evolution of DUX gene macrosatellites in placental mammals
Abstract
Macrosatellites are large polymorphic tandem arrays. The human subtelomeric macrosatellite D4Z4 has 11-150 repeats, each containing a copy of the intronless DUX4 gene. DUX4 is linked to facioscapulohumeral muscular dystrophy, but its normal function is unknown. The DUX gene family includes DUX4, the intronless Dux macrosatellites in rat and mouse, as well as several intron-containing members (DUXA, DUXB, Duxbl, and DUXC). Here, we report that the genomic organization (though not the syntenic location) of primate DUX4 is conserved in the Afrotheria. In primates and Afrotheria, DUX4 arose by retrotransposition of an ancestral intron-containing DUXC, which is itself not found in these species. Surprisingly, we discovered a similar macrosatellite organization for DUXC in cow and other Laurasiatheria (dog, alpaca, dolphin, pig, and horse), and in Xenarthra (sloth). Therefore, DUX4 and Dux are not the only DUX gene macrosatellites. Our data suggest a new retrotransposition-displacement model for the evolution of intronless DUX macrosatellites.
Similar articles
-
A family history of DUX4: phylogenetic analysis of DUXA, B, C and Duxbl reveals the ancestral DUX gene.BMC Evol Biol. 2010 Nov 26;10:364. doi: 10.1186/1471-2148-10-364. BMC Evol Biol. 2010. PMID: 21110847 Free PMC article.
-
Canine DUXC: implications for DUX4 retrotransposition and preclinical models of FSHD.Hum Mol Genet. 2022 May 19;31(10):1694-1704. doi: 10.1093/hmg/ddab352. Hum Mol Genet. 2022. PMID: 34888646 Free PMC article.
-
Evolutionary conservation of a coding function for D4Z4, the tandem DNA repeat mutated in facioscapulohumeral muscular dystrophy.Am J Hum Genet. 2007 Aug;81(2):264-79. doi: 10.1086/519311. Epub 2007 Jun 27. Am J Hum Genet. 2007. PMID: 17668377 Free PMC article.
-
A complex interplay of genetic and epigenetic events leads to abnormal expression of the DUX4 gene in facioscapulohumeral muscular dystrophy.Neuromuscul Disord. 2016 Dec;26(12):844-852. doi: 10.1016/j.nmd.2016.09.015. Epub 2016 Sep 19. Neuromuscul Disord. 2016. PMID: 27816329 Review.
-
Facioscapulohumeral muscular dystrophy (FSHD): an enigma unravelled?Hum Genet. 2012 Mar;131(3):325-40. doi: 10.1007/s00439-011-1100-z. Epub 2011 Oct 9. Hum Genet. 2012. PMID: 21984394 Review.
Cited by
-
Endogenous Retroviruses Function as Gene Expression Regulatory Elements During Mammalian Pre-implantation Embryo Development.Int J Mol Sci. 2019 Feb 12;20(3):790. doi: 10.3390/ijms20030790. Int J Mol Sci. 2019. PMID: 30759824 Free PMC article. Review.
-
Facioscapulohumeral dystrophy: activating an early embryonic transcriptional program in human skeletal muscle.Hum Mol Genet. 2018 Aug 1;27(R2):R153-R162. doi: 10.1093/hmg/ddy162. Hum Mol Genet. 2018. PMID: 29718206 Free PMC article. Review.
-
Mouse Dux is myotoxic and shares partial functional homology with its human paralog DUX4.Hum Mol Genet. 2016 Oct 15;25(20):4577-4589. doi: 10.1093/hmg/ddw287. Hum Mol Genet. 2016. PMID: 28173143 Free PMC article.
-
Cellular and animal models for facioscapulohumeral muscular dystrophy.Dis Model Mech. 2020 Oct 28;13(10):dmm046904. doi: 10.1242/dmm.046904. Dis Model Mech. 2020. PMID: 33174531 Free PMC article. Review.
-
Transgenic Drosophila for Investigating DUX4 and FRG1, Two Genes Associated with Facioscapulohumeral Muscular Dystrophy (FSHD).PLoS One. 2016 Mar 4;11(3):e0150938. doi: 10.1371/journal.pone.0150938. eCollection 2016. PLoS One. 2016. PMID: 26942723 Free PMC article.
References
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources