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Commits on Nov 13, 2024

• Merge pull request #409 from slideflow/add_features

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  matte-esse

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Commits on Nov 8, 2024

• Use MPS devices for feature extractors, by default, when available

  jamesdolezal

  committed
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Commits on Oct 18, 2024

• Fix dataset splitting for survival models

  jamesdolezal

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  c596d2c

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• Update version number

  jamesdolezal

  committed
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• Require spacy<3.8 to prevent numpy incompatibility

  jamesdolezal

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Commits on Oct 15, 2024

• Workaround for inability to write log file

  jamesdolezal

  committed
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• Minor segmentation improvements

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  jamesdolezal

  committed
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Commits on Oct 13, 2024

• Update tensorflow dockerfile

  jamesdolezal

  committed
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Commits on Oct 11, 2024

• Update torch dockerfile to show welcome message

  jamesdolezal

  committed
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• Update torch.Dockerfile

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  jamesdolezal

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• Dataset.tfrecord_report() returns ExtractionReport

  jamesdolezal

  committed
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• Update setup.py; add pyarrow to requirements

  jamesdolezal

  committed
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• Numpy 2.0 compatibility update

  jamesdolezal

  committed
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• Unit test fixes; increase testing verbosity [#419]

  jamesdolezal

  committed
  1a40a13

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• Bug fix in unit tests [#419]

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  jamesdolezal

  committed
  9bc061f

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• Fix docker hub address [#424]

  jamesdolezal

  committed
  f77fb80

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• Update README.md

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  jamesdolezal

  authored
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• Update to CuCIM micron-per-pixel detection [#420]

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  jamesdolezal

  committed
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• Minor fixes

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  jamesdolezal

  committed
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Commits on Sep 25, 2024

• Fix slide progress bar during bag generation

  jamesdolezal

  committed
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Commits on Sep 24, 2024

• Fix bag generation progress bar estimation if there are fewer tfrecords than slides

  jamesdolezal

  committed
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Commits on Sep 17, 2024

• Fix error message text when verifying bag size matches MIL model

  jamesdolezal

  committed
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Commits on Sep 10, 2024

• Fix TypeError: 'NoneType' object is not subscriptable when attempting to get an image tile from a slide via indexing and the image tile is invalid (e.g. out of bounds; corrupted; etc)

  jamesdolezal

  committed
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• Fix lifelines requirement [#414]

  jamesdolezal

  committed
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Commits on Sep 6, 2024

• Improve configuration comparison warning when generating feature bags

  jamesdolezal

  committed
  b1eae99

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• Update version numbers

  jamesdolezal

  committed
  2bfbcb1

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• Fix progress bar total tile estimation when generating feature bags

  jamesdolezal

  committed
  004d9d0

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• Add ability to provide preprocessing kwargs to pytorch ImageNet feature extractors [#412]

  jamesdolezal

  committed
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• Fix Studio crash [#413]

  jamesdolezal

  committed
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Commits on Aug 28, 2024

• Improve accuracy of ROI filtering for WSIs

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  jamesdolezal

  committed
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Commits on Aug 27, 2024

• Bug fix [#412]

  jamesdolezal

  committed
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Commits on Aug 26, 2024

• Fix rare cupy_backends.cuda.api.runtime.CUDARuntimeError

  jamesdolezal

  committed
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Commits on Aug 25, 2024

• cuCIM backend fix

  jamesdolezal

  committed
  257dfa8

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• Add WSI features

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  jamesdolezal

  committed
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• Bug fix

  jamesdolezal

  committed
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