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heatmap_CNV.Rd
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% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/heatmap_CNV.R
\name{heatmap_CNV}
\alias{heatmap_CNV}
\title{CNV Heatmap}
\usage{
heatmap_CNV(
scMuffinList = NULL,
genes = NULL,
genes.labels = FALSE,
mark.detected.cnv = FALSE,
file = NULL,
width = 180,
height = 180,
units = "mm",
res = 300,
cluster_fontsize = 8,
chrom_fontsize = 8,
legend_fontsize = 8,
genes.labels.fontsize = 8,
...
)
}
\arguments{
\item{scMuffinList}{scMuffinList object}
\item{genes}{gene labels to show as row annotation}
\item{genes.labels}{whether to show gene labels or just mark their position}
\item{mark.detected.cnv}{whether to show detected CNV regions}
\item{file}{File name to save the figure as png file}
\item{width}{image width}
\item{height}{image height}
\item{units}{image units}
\item{res}{image resolution}
\item{cluster_fontsize}{cluster fontsize}
\item{chrom_fontsize}{chromosome fontsize}
\item{legend_fontsize}{legend fontsize}
\item{genes.labels.fontsize}{gene labels fontsize}
\item{...}{arguments passed to ComplexHeatmap::Heatmap}
}
\description{
CNV Heatmap
}