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Commits on Mar 22, 2023

• fix error majiq probability_no_change is not a numeric vector.

  tbrittoborges

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  e2648cf

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• remove conda-env

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  tbrittoborges

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Commits on Dec 16, 2022

• fix to majiq parser for NA

  tbrittoborges

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Commits on Nov 29, 2022

• rm shadown directories

  tbrittoborges

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  38e898b

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Commits on Aug 1, 2022

• fix but in parse_majiq

  tbrittoborges

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Commits on May 11, 2022

• Fixing Jenkinsfile

  

  Harald Wilhelmi

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  c436a0e

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• More Jenkinsfile fixing ...

  

  Harald Wilhelmi

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  5011a2e

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• Still fixing Jenkinsfile

  

  Harald Wilhelmi

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  31cd075

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• Ficing Jenkinsfile

  

  Harald Wilhelmi

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• Addiding Jenkinsfiles for multibranch pipelines

  

  Harald Wilhelmi

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Commits on May 10, 2022

• lint parse_gffcompare_stats

  tbrittoborges

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• lint command.py

  tbrittoborges

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Commits on Apr 14, 2022

• Clarify docs for user-defined location for singularity containers; fix #20

  tbrittoborges

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  7eb880b

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• force chr as character type

  tbrittoborges

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  4940817

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• cleanup: remove envmodules

  tbrittoborges

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  c819541

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Commits on Mar 29, 2022

• fix 19

  tbrittoborges

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Commits on Mar 10, 2022

• make pos and neg instances parsing identical

  tbrittoborges

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  743ec21

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Commits on Jan 11, 2022

• documentation update to v2.1.2

  tbrittoborges

  committed
  454058c

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• initial commit

  tbrittoborges

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  36a3279

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• add bind_paths configuration, to resolve usecase if integrating from multiple projects

  tbrittoborges

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  430a8fe

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• add ucsc_url config to allow using selfhosted genome browser

  tbrittoborges

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• output coordinates without strand, if lib is unstranded

  tbrittoborges

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  86e8bd9

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Commits on Jan 4, 2022

• fix citation

  tbrittoborges

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  6d4cd7a

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• fix citation

  tbrittoborges

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  a0dd5e7

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• add citation

  tbrittoborges

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  475150e

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Commits on Jan 3, 2022

• negative class

  tbrittoborges

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  e0bacea

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• positive class

  tbrittoborges

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  3ea323a

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Commits on Dec 23, 2021

• small fix

  tbrittoborges

  committed
  4af9838

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• add support to unstranded libraries

  tbrittoborges

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  a819578

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Commits on Dec 17, 2021

• resolves missing comparison column if there is a single comparison

  tbrittoborges

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  c23fd24

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Commits on Dec 13, 2021

• fix anno color

  tbrittoborges

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  2540e36

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Commits on Nov 25, 2021

• fix unicode chars

  tbrittoborges

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Commits on Nov 24, 2021

• remove group column

  tbrittoborges

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  d8dcdcc

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• dont create orthogonal column if orthognal dataset missing from config

  tbrittoborges

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  ca21f52

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• remove groups, pre-sort the table, assumes novel is TRUE for NA

  tbrittoborges

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