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I downloaded refseq database and run kaiju for taxonomic assignment of sample DRR496098 downloaded from SRA, in the kaiju/bin directory using the command below;
./kaiju -t ../../kaiju_db/nodes.dmp -f ../../kaiju_db/kaiju_db_refseq.fmi -i ../../MSB7103_Assignment/raw_data/DRR496098_1.fastq -j ../../MSB7103_Assignment/raw_data/DRR496098_2.fastq -o kaiju_output.txt
I keep getting the error below;
Segmentation fault (core dumped)
I made all files in the kaiju/bin readable and executable
I have adequate space available, over 500GB
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