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@NBISweden

NBIS - National Bioinformatics Infrastructure Sweden

NBIS is a distributed national bioinformatics infrastructure, supporting life sciences in Sweden.

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  1. MrBayes MrBayes Public

    MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:

    C 239 79

  2. EMBLmyGFF3 EMBLmyGFF3 Public

    An efficient way to convert gff3 annotation files into EMBL format ready to submit.

    Python 59 15

  3. development-guidelines development-guidelines Public

    Development guidlines for software within NBIS.

    17 9

  4. excelerate-scRNAseq excelerate-scRNAseq Public

    Single RNA-seq data analysis with R (Finland, May, 2019)

    HTML 218 107

  5. GAAS GAAS Public

    Genome Assembly and Annotation Service code

    Perl 206 47

  6. IgDiscover-legacy IgDiscover-legacy Public archive

    Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads

    Python 17 10

Repositories

Showing 10 of 309 repositories
  • aida-genai-workshop Public

    Workshop files for the AIDA Data Hub Generative AI workshop

    NBISweden/aida-genai-workshop’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Feb 6, 2025
  • ceph_utils Public

    Various scripts used to setup and interact with a Ceph cluster

    NBISweden/ceph_utils’s past year of commit activity
    Shell 1 0 0 0 Updated Feb 5, 2025
  • workshop-scRNAseq-devel Public Forked from NBISweden/workshop-scRNAseq

    Single cell RNA sequencing analysis course

    NBISweden/workshop-scRNAseq-devel’s past year of commit activity
    HTML 0 101 3 0 Updated Feb 5, 2025
  • bp-sweden-web Public

    Website for BigPicture Sweden

    NBISweden/bp-sweden-web’s past year of commit activity
    SCSS 0 MIT 0 1 0 Updated Feb 5, 2025
  • strobealign-evaluation Public
    NBISweden/strobealign-evaluation’s past year of commit activity
    Python 0 0 0 0 Updated Feb 5, 2025
  • workshop-reproducible-research Public

    NBIS/Elixir course: Tools for Reproducible Research

    NBISweden/workshop-reproducible-research’s past year of commit activity
    HTML 63 CC-BY-4.0 32 7 0 Updated Feb 5, 2025
  • bp-landing-pages Public

    Bigpicture project dataset landing page generator

    NBISweden/bp-landing-pages’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 4, 2025
  • sda-services-backup Public
    NBISweden/sda-services-backup’s past year of commit activity
    Go 2 1 1 1 Updated Feb 4, 2025
  • teaching_literature_club Public

    NBIS' teaching literature club

    NBISweden/teaching_literature_club’s past year of commit activity
    Shell 0 GPL-3.0 1 0 0 Updated Feb 3, 2025
  • GenErode Public

    GitHub repository for GenErode, a Snakemake pipeline for the analysis of whole-genome sequencing data from historical and modern samples to study patterns of genome erosion.

    NBISweden/GenErode’s past year of commit activity
    Python 25 GPL-3.0 7 15 2 Updated Feb 3, 2025
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