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Improved write_mask with optional "wsa_mask". #71

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JoeySpronck
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This allows to mask out regions from the patches that are sampled from the already provided wsa. For example, you can add a wsa_mask with {"rois":1} label mapping to only write the labels of the wsa INSIDE the "rois" annotations, removing all regions from annotations that exeed the ROIs. Also added option to overwrite output if it already existed.

… regions from the patches that are sampled from the already provided wsa. For example, you can add a wsa_mask with {"rois":1} label mapping to only write the labels of the wsa INSIDE the "rois" annotations, removing all regions from annotations that exeed the ROIs. Also added option to overwrite output if it already existed.
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Pull Request Test Coverage Report for Build 11958595780

Details

  • 6 of 10 (60.0%) changed or added relevant lines in 1 file are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage decreased (-0.08%) to 72.612%

Changes Missing Coverage Covered Lines Changed/Added Lines %
wholeslidedata/interoperability/asap/imagewriter.py 6 10 60.0%
Totals Coverage Status
Change from base Build 11723203292: -0.08%
Covered Lines: 2235
Relevant Lines: 3078

💛 - Coveralls

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