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11
votes
9
replies
2.9k
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8 follow
Why it is not use UMIs for RNA-seq?
RNA-Seq UMIs scRNA-seq
updated 4 months ago by ▴ 30 • written 4.0 years ago by ★ 1.3k
3
votes
0
replies
239
views
Comparing ATAC-seq narrowPeak Files from Chicken and Mouse
liftOver ATAC-seq csaw
updated 5 months ago by 44k • written 5 months ago by ★ 1.3k
0
votes
0
replies
1.3k
views
Comment: Comment: RNA Contamination Tool for Developing Cell Samples
10 months ago by Rafael Soler ★ 1.3k
0
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1
reply
1.3k
views
Comment: Comment: RNA Contamination Tool for Developing Cell Samples
10 months ago by Rafael Soler ★ 1.3k
9
votes
8
replies
1.3k
views
RNA Contamination Tool for Developing Cell Samples
scRNA contamination SoupX
updated 10 months ago by 44k • written 11 months ago by ★ 1.3k
0
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1
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1.3k
views
Comment: Comment: RNA Contamination Tool for Developing Cell Samples
10 months ago by Rafael Soler ★ 1.3k
1
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0
replies
1.3k
views
Comment: Comment: RNA Contamination Tool for Developing Cell Samples
11 months ago by Rafael Soler ★ 1.3k
0
votes
0
replies
2.1k
views
Comment: Comment: Annotating TSS: By Transcript or by Gene? Code Validation Help Needed!
13 months ago by Rafael Soler ★ 1.3k
15
votes
6
replies
2.1k
views
Annotating TSS: By Transcript or by Gene? Code Validation Help Needed!
genome bed transcript TSS
13 months ago by Rafael Soler ★ 1.3k
0
votes
0
replies
2.1k
views
Answer: Answer: Annotating TSS: By Transcript or by Gene? Code Validation Help Needed!
13 months ago by Rafael Soler ★ 1.3k
1
vote
1
reply
2.1k
views
Comment: Comment: Annotating TSS: By Transcript or by Gene? Code Validation Help Needed!
17 months ago by Rafael Soler ★ 1.3k
0
votes
0
replies
3.2k
views
Comment: Comment: How to perform synteny alignments and plots only with a gene?
19 months ago by Rafael Soler ★ 1.3k
1
vote
1
reply
3.2k
views
Comment: Comment: How to perform synteny alignments and plots only with a gene?
19 months ago by Rafael Soler ★ 1.3k
0
votes
1
reply
3.2k
views
Comment: Comment: How to perform synteny alignments and plots only with a gene?
19 months ago by Rafael Soler ★ 1.3k
12
votes
8
replies
3.2k
views
How to perform synteny alignments and plots only with a gene?
Comparative Evolution Alignment Synteny Genomics
19 months ago by Rafael Soler ★ 1.3k
3
votes
0
replies
432
views
miRNA-seq count by "ID" or "Alias" using mirBase mmu.gff3
HTSeq miRNA mirBase
2.0 years ago by Rafael Soler ★ 1.3k
3
votes
0
replies
1.4k
views
Answer: Answer: SCTransform in single cell
2.1 years ago by Rafael Soler ★ 1.3k
5
votes
0
replies
658
views
Answer: Answer: rna sample QC report (eukaryotic )
2.1 years ago by Rafael Soler ★ 1.3k
1
vote
0
replies
1.7k
views
Comment: Comment: How to calculate if statistically a variable of a bulk RNA-seq affects the compa
2.1 years ago by Rafael Soler ★ 1.3k
3
votes
0
replies
1.7k
views
Comment: Comment: How to calculate if statistically a variable of a bulk RNA-seq affects the compa
2.1 years ago by Rafael Soler ★ 1.3k
3
votes
1
reply
1.7k
views
Comment: Comment: How to calculate if statistically a variable of a bulk RNA-seq affects the compa
2.1 years ago by Rafael Soler ★ 1.3k
1
vote
1
reply
1.7k
views
Comment: Comment: How to calculate if statistically a variable of a bulk RNA-seq affects the compa
2.1 years ago by Rafael Soler ★ 1.3k
18
votes
7
replies
1.7k
views
How to calculate if statistically a variable of a bulk RNA-seq affects the comparison of interest?
DESeq2 Variable RNA-seq
2.1 years ago by Rafael Soler ★ 1.3k
0
votes
0
replies
1.2k
views
Comment: Comment: 5' and 3' UTRs in RNA regulation
2.1 years ago by Rafael Soler ★ 1.3k
1
vote
0
replies
1.1k
views
Answer: Answer: Good morning
2.2 years ago by Rafael Soler ★ 1.3k
5
votes
1
reply
1.2k
views
Answer: Answer: 5' and 3' UTRs in RNA regulation
2.2 years ago by Rafael Soler ★ 1.3k
5
votes
0
replies
779
views
Answer: Answer: What does it mean enriched gene sets at nominal p-value <1%? GSEA
2.2 years ago by Rafael Soler ★ 1.3k
3
votes
0
replies
1.1k
views
Answer: Answer: Identifying tumor vs normal cells in scRNAseq samples
2.2 years ago by Rafael Soler ★ 1.3k
0
votes
1
reply
1.4k
views
Comment: Comment: How DESeq2 formula correction works?
2.2 years ago by Rafael Soler ★ 1.3k
1
vote
0
replies
1.4k
views
Comment: Comment: How DESeq2 formula correction works?
2.2 years ago by Rafael Soler ★ 1.3k
3
votes
1
reply
1.2k
views
Comment: Comment: GSEA report, What does it mean gene sets are upregulated?
2.2 years ago by Rafael Soler ★ 1.3k
2
votes
1
reply
1.4k
views
Comment: Comment: How DESeq2 formula correction works?
2.2 years ago by Rafael Soler ★ 1.3k
12
votes
7
replies
1.4k
views
How DESeq2 formula correction works?
GLM DESeq2 Batch-effect
updated 3 months ago by 44k • written 2.2 years ago by ★ 1.3k
4
votes
1
reply
1.2k
views
Answer: Answer: GSEA report, What does it mean gene sets are upregulated?
2.2 years ago by Rafael Soler ★ 1.3k
3
votes
0
replies
3.1k
views
Comment: Comment: Analyzing single cell RNA seq with multiple samples and conditions
2.2 years ago by Rafael Soler ★ 1.3k
5
votes
1
reply
3.1k
views
Answer: Answer: Analyzing single cell RNA seq with multiple samples and conditions
2.2 years ago by Rafael Soler ★ 1.3k
1
vote
1
reply
1.2k
views
Comment: Comment: Export list of full length DNA gene sequences
2.3 years ago by Rafael Soler ★ 1.3k
2
votes
1
reply
1.2k
views
Answer: Answer: Export list of full length DNA gene sequences
2.3 years ago by Rafael Soler ★ 1.3k
0
votes
0
replies
793
views
Answer: Answer: ESTIMATION OF LEVEL OF CYTOKINES FROM BULK RNAseq
2.3 years ago by Rafael Soler ★ 1.3k
1
vote
0
replies
1.2k
views
Comment: Comment: Multiple exposure timelines (time-points) in one DESeq2 object or multiple DESeq
2.3 years ago by Rafael Soler ★ 1.3k
0
votes
0
replies
616
views
Answer: Answer: gene library composition
2.3 years ago by Rafael Soler ★ 1.3k
1
vote
1
reply
1.2k
views
Answer: Answer: Multiple exposure timelines (time-points) in one DESeq2 object or multiple DESeq
updated 2.3 years ago by 85k • written 2.3 years ago by ★ 1.3k
0
votes
0
replies
995
views
Comment: Comment: What's the full list of UniProt topological domain types?
2.3 years ago by Rafael Soler ★ 1.3k
0
votes
0
replies
3.5k
views
Comment: Comment: How to add color gradient guide to my FeaturePlot?
2.3 years ago by Rafael Soler ★ 1.3k
5
votes
1
reply
3.5k
views
Answer: Answer: How to add color gradient guide to my FeaturePlot?
2.3 years ago by Rafael Soler ★ 1.3k
9
votes
7
replies
1.2k
views
How to subtract or sum 12 depending on the last and following line using awk?
grep Awk bash
updated 2.5 years ago by 4.9k • written 2.5 years ago by ★ 1.3k
0
votes
0
replies
1.2k
views
Comment: Comment: How to substact or sum 12 depeding on the last and following line using awk?
2.5 years ago by Rafael Soler ★ 1.3k
3
votes
2
replies
3.6k
views
Answer: Answer: make a BED file with exons only
2.6 years ago by Rafael Soler ★ 1.3k
0
votes
0
replies
2.2k
views
Comment: Comment: Pool or not to pool
2.6 years ago by Rafael Soler ★ 1.3k
0
votes
1
reply
2.2k
views
Comment: Comment: Pool or not to pool
2.6 years ago by Rafael Soler ★ 1.3k
97 results • Page 1 of 2
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