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42 results • Page
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Showing top results for tag:
small
•
reset
0
votes
0
replies
204
views
Difference in mapping rate when aligned with mapper.pl of miReep2 and bowtie1
miRNASeq
bowtie
RNASeq
miRDeep2
small
3 months ago by
MIKA
• 0
3
votes
2
replies
739
views
Small RNA sequencing using Illumina 2 channel SBS: how to deal with Gs?
SBS
small
RNA
updated 11 months ago by
size_t
▴ 120 • written 11 months ago by
antoinefelden
▴ 60
0
votes
1
reply
781
views
Convert from SDF to FASTA
SDF
molecule
fasta
ML
small
updated 12 months ago by
Philipp Bayer
8.7k • written 12 months ago by
tpritsky
• 0
0
votes
6
replies
977
views
Is there a way to check the quality of small RNA library before receiving raw data from small RNA seq?
small
library
RNA
updated 15 months ago by
colindaven
6.7k • written 15 months ago by
jae kyoung
• 0
1
vote
3
replies
872
views
miRDeep2 mapper.pl not generating *collapsed.fa and/or *.arf files correctly?
small
RNA
miRDeep2
sequencing
updated 17 months ago by
Trivas
★ 1.8k • written 17 months ago by
jammydodger123456
▴ 40
2
votes
5
replies
1.0k
views
BLASTP - Searching for homologous sequences of small peptides in several species
small
peptide
blastp
22 months ago by
瑞宏
• 0
2
votes
0
replies
341
views
Do I need to run cmscan when analyzing small RNA sequences?
small
RNA
cmscan
infernal
24 months ago by
Naemul
▴ 20
0
votes
1
reply
485
views
Differential expression of small RNAs from smallRNAseq datasets
RNA
smallRNAseq
small
sequencing
Expression
pipeline
Differential
updated 23 months ago by
Marcel Ribeiro-Dantas
▴ 590 • written 24 months ago by
Aiswarya
▴ 10
2
votes
7
replies
1.1k
views
Fastqc report for small RNA sequencing
RNA
FastQC
smallRNAseq
small
sequencing
24 months ago by
Aiswarya
▴ 10
0
votes
0
replies
674
views
Adapter sequences left after trimming small RNA seq data with TrimGalore!
Trim
small
miRNA
RNA
Galore
2.0 years ago by
ntsopoul
▴ 60
0
votes
2
replies
655
views
how to use mirdeep2 without a small RNA library
mirna
microrna
small
seq
rna
mirdeep2
2.1 years ago by
Beatriz
• 0
0
votes
5
replies
1.7k
views
Bowtie2 end-to-end versus local alignment for small RNAseq
small
RNAseq
bowtie
alignment
updated 9 months ago by
xiaoleiusc
▴ 140 • written 2.2 years ago by
theune
• 0
0
votes
1
reply
468
views
Should I align sRNA-seq data to all ncRNA or ncRNA from a species?
Bowtie
small
miRNA
Alignment
plant
RNA
updated 2.3 years ago by
GenoMax
145k • written 2.3 years ago by
Rey
• 0
0
votes
0
replies
384
views
extract rRNA/tRNA and other ncRNA ratio in a table from small RNA-seq
non-coding
small
RNA-seq
miRNA
analysis
RNA
clustering
2.3 years ago by
Rey
• 0
0
votes
0
replies
348
views
Whether there is any pre-miRNA small-molecule interactions database?
database
molecule
small
pre-miRNA
2.8 years ago by
王华北
• 0
4
votes
11
replies
2.8k
views
How to remove Illumina_small_rna_3'_adapter adapters without knowing their sequence?
rna
small
updated 2.8 years ago by
GenoMax
145k • written 2.8 years ago by
Wendy Lorena
• 0
1
vote
2
replies
1.4k
views
small RNA-Seq analysis and doubts
nc
RNA-Seq
small
miRNA-Seq
3.2 years ago by
Sergio
• 0
0
votes
0
replies
564
views
tRNA fragment
RNA-seq
small
3.3 years ago by
972050141
• 0
1
vote
2
replies
794
views
miRNA length distribution
miRNA
rna
small
3.5 years ago by
LynxLynx
• 0
1
vote
4
replies
4.3k
views
Illumina Smallrna-Seq Experiment Using Smrna-Seq V1.5 Library Prep - Strange Results When Aligning Reads
illumina
small
next-gen
sequencing
updated 5.0 years ago by
Biostar
20 • written 12.7 years ago by
Sebastian Kurscheid
▴ 300
0
votes
2
replies
2.5k
views
small .bam files to test GATK Variant Discovery pipeline
bam
small
GATK
test
Variant Discovery
7.1 years ago by
alongalor
• 0
7
votes
4
replies
4.2k
views
Small Rna Downstream Analysis Pipeline
small
solid
sequence
updated 7.7 years ago by
Biostar
20 • written 14.1 years ago by
Newbie
▴ 40
3
votes
4
replies
4.4k
views
Many 0 length reads after trimming
trimming
fastQC
RNA-Seq
small
rna
updated 8.7 years ago by
Biostar
20 • written 8.7 years ago by
marcon
▴ 10
0
votes
1
reply
4.5k
views
Human Non Coding Rrna Sequences For Download
small
rna
rrna
mirna
updated 9.3 years ago by
Biostar
20 • written 12.5 years ago by
Ngsnewbie
▴ 380
5
votes
6
replies
4.9k
views
De Novo Small Rna Transcriptome Assembly For Non-Model Species?
transcriptome
assembly
small
updated 2.5 years ago by
Ram
44k • written 12.6 years ago by
Ahdf-Lell-Kocks
★ 1.6k
0
votes
0
replies
1.6k
views
Quantitative trait Loci analysis of deep sequencing data (miRNAs)
RNA
next-gen
small
QTL
updated 3.5 years ago by
Ram
44k • written 9.9 years ago by
mayurdivate
• 0
1
vote
7
replies
8.6k
views
6 follow
Small Rna (Mirna) Mapping
small
rna
mapping
updated 2.8 years ago by
Ram
44k • written 12.7 years ago by
Sara
▴ 170
0
votes
1
reply
2.2k
views
Why Does The Small Rna Sequencing Have Not Duplicates?
small
rna
10.9 years ago by
2011101101
▴ 110
8
votes
5
replies
4.0k
views
Cluster Ligand Database And Extract Fragments
clustering
alignment
small
updated 11.1 years ago by
Biostar
20 • written 12.6 years ago by
Flow
★ 1.6k
2
votes
1
reply
2.7k
views
Find Sense Antisense Pairs In 2 Fasta Files
small
rna
mapping
fasta
11.2 years ago by
jkhurana2311
• 0
31
votes
26
replies
9.9k
views
12 follow
How To Discard Sequences Longer Than N Nucleotides ?
small
rna
data
updated 2.0 years ago by
Ram
44k • written 11.7 years ago by
2011101101
▴ 110
4
votes
5
replies
3.6k
views
What Ngs Read Simulators Are Available For Single-End 35Base Pair Length Data?
small
mirna
simulation
next-gen
sequencing
updated 12.2 years ago by
Zhidkov
▴ 600 • written 12.6 years ago by
Chintzz
• 0
2
votes
2
replies
2.1k
views
Gene Symbol To Gene Type
gene
protein
code
small
updated 12.5 years ago by
Gjain
5.8k • written 12.5 years ago by
Diya
▴ 10
4
votes
3
replies
4.8k
views
Comparing 2 Small Molecules For Similarity?
small
similarity
updated 12.6 years ago by
Wolf Ihlenfeldt
▴ 150 • written 12.6 years ago by
Siddnitr1
• 0
7
votes
14
replies
8.8k
views
8 follow
Aligning Reads From Small Rna-Seq Onto Human Genome
next-gen
sequencing
rna
short
aligner
alignment
small
updated 12.6 years ago by
Vikas Bansal
★ 2.4k • written 12.6 years ago by
Leszek
4.2k
5
votes
11
replies
7.1k
views
6 follow
Small Molecule Superposition Tool
small
updated 12.6 years ago by
Egon Willighagen
5.4k • written 12.6 years ago by
Nir London
▴ 220
2
votes
1
reply
3.6k
views
Characterize Known And Novel Mirna
mirna
small
short
bowtie
alignment
updated 12.8 years ago by
Rm
8.3k • written 12.8 years ago by
Mushal
▴ 10
4
votes
3
replies
3.2k
views
Sra Data: Getting Rna-Seq /Ncrna Experiments Ids For A Taxon
sra
rna
small
updated 13.6 years ago by
Hamish
★ 3.3k • written 13.6 years ago by
Darked89
4.7k
6
votes
6
replies
4.0k
views
Problem With Rfam Search
database
small
updated 13.6 years ago by
Paul Gardner
▴ 190 • written 13.8 years ago by
Ajw
▴ 30
8
votes
1
reply
3.3k
views
Small Rna Analysis
small
analysis
illumina
rrna
updated 13.8 years ago by
Prateek
★ 1.0k • written 13.8 years ago by
Janake
▴ 170
11
votes
9
replies
4.4k
views
Best Reference For Small Rna Alignment And Annotation
small
alignment
annotation
reference
updated 13.8 years ago by
Michael
55k • written 13.8 years ago by
Doctoroots
▴ 800
24
votes
9
replies
8.8k
views
Extracting An Up Stream Or Downstream Sequence From Given Position
small
data
genomics
sequence
updated 14.1 years ago by
brentp
24k • written 14.1 years ago by
Janake
▴ 170
42 results • Page
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