Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : all time
all time
today
this week
this month
this year
23 results • Page
1 of 1
Sort: Rank
Rank
Views
Votes
Replies
Showing top results for tag:
Update
•
reset
0
votes
2
replies
1.5k
views
How to update R on ubuntu
installation
update
R
apt-get
6 months ago by
Bosberg
▴ 50
0
votes
1
reply
626
views
updateR() error
R
update
updated 7 months ago by
dthorbur
★ 2.5k • written 7 months ago by
marco.barr
▴ 150
0
votes
1
reply
833
views
Updating hg 18 .bim file with lifted .map and .bed file
plink
liftOver
update
rsid
updated 2.1 years ago by
Samah
• 0 • written 2.1 years ago by
hi.there
• 0
0
votes
0
replies
550
views
Liftover and Then Update RSIDs
plink
chrom
update
rsid
2.2 years ago by
hi.there
• 0
0
votes
1
reply
588
views
No overlap of Chrome and Chrome End Position in RSID Update
plink
chrom
update
rsid
updated 2.2 years ago by
Pierre Lindenbaum
164k • written 2.2 years ago by
hi.there
• 0
3
votes
6
replies
1.6k
views
updating .bim with new rsids
plink
chrom
update
rsid
2.3 years ago by
hi.there
• 0
1
vote
2
replies
842
views
plink update .bim question
plink
chrom
update
rsid
2.3 years ago by
hi.there
• 0
2
votes
1
reply
982
views
Update SNP map
assembly
update
SNP
map
updated 3.2 years ago by
tothepoint
▴ 930 • written 3.2 years ago by
Rafael
• 0
0
votes
0
replies
1.0k
views
GenBank entry with apparently unmarked changes
genbank
entry
item
version
update
5.9 years ago by
Anima Mundi
★ 2.9k
2
votes
6
replies
5.4k
views
How to update nr database for commandline BLAST?
update
BLAST
database
6.3 years ago by
tcf.hcdg
▴ 70
1
vote
5
replies
1.7k
views
Program for updating custom annotations with new genome?
assembly
next-gen
RNA-Seq
update
annotations
6.6 years ago by
brismiller
▴ 60
0
votes
8
replies
2.9k
views
How can I update OrthoFinder
orthofinder
update
uninstall
updated 6.9 years ago by
david_emms
▴ 160 • written 7.8 years ago by
mirza
▴ 180
1
vote
2
replies
1.5k
views
Galaxy local update
galaxy
local
update
updated 7.2 years ago by
Peter
6.0k • written 7.3 years ago by
anoopa.p
• 0
2
votes
18
replies
2.4k
views
How to update the fileds in bedfiles (or dataframes) based on overlaps from between intervals of two bedfiles (dataframes)?
bedtools
merge
python
gene_features
update
7.5 years ago by
kirannbishwa01
★ 1.6k
3
votes
6
replies
3.5k
views
Update R in Unix Shell
R
update
updated 7.6 years ago by
Biostar
20 • written 8.1 years ago by
gokce.ouz
▴ 70
5
votes
4
replies
2.1k
views
OMA current state and its updates
oma
orthologs
bacteria
update
updated 7.6 years ago by
Christophe Dessimoz
▴ 740 • written 7.6 years ago by
natasha.sernova
★ 4.0k
1
vote
0
replies
1.9k
views
Update/Patch an AGP-recorded genome assembly?
genome
assembly
agp
patch
update
updated 7.7 years ago by
Biostar
20 • written 8.1 years ago by
Felix Bemm
▴ 20
1
vote
1
reply
1.9k
views
Getting plant full length cDNA sequences from NCBI
cDNA
BLAST
NCBI
Update
updated 7.8 years ago by
apa@stowers
▴ 600 • written 7.8 years ago by
abhijit.synl
▴ 60
16
votes
9
replies
4.1k
views
Most up-to-date Gene Ontology [GO] analysis?
gene ontology
enrichment
genes
update
david
updated 8.2 years ago by
LLTommy
★ 1.2k • written 8.2 years ago by
O.rka
▴ 740
15
votes
4
replies
3.5k
views
How to convert old entrez id to updated-entrez id in R?
entrez id
R
update
updated 8.3 years ago by
Giovanni M Dall'Olio
28k • written 8.3 years ago by
agicict
▴ 200
3
votes
5
replies
2.2k
views
Is it possible to automatically update NCBI fasta sequences in command-line?
ncbi
fasta
update
command-line
updated 8.4 years ago by
Matt Shirley
10k • written 8.4 years ago by
hcwang
▴ 50
4
votes
8
replies
6.0k
views
Updating Python in my folder on the cluster
Python
Cluster
Update
updated 2.6 years ago by
Ram
44k • written 9.8 years ago by
stu111392
▴ 30
1
vote
4
replies
10k
views
How update Blast+?
blast
update
updated 2.8 years ago by
Ram
44k • written 10.1 years ago by
sebastian.f.ing
▴ 20
23 results • Page
1 of 1
Recent Votes
Comment: Finding Differential Phosphosites in TMT Phosphoproteomics Data
Answer: Compare Two Sigle-cell Sample for Differentially Expressed Genes (DEGs). How?
How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
A: How do I ask a question on Biostars?
Answer: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
Answer: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
Answer: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
Recent Locations •
All
India,
2 minutes ago
United Kingdom,
6 minutes ago
United Kingdom,
15 minutes ago
Norway,
15 minutes ago
Germany,
15 minutes ago
Bologna,
17 minutes ago
Hong Kong,
18 minutes ago
Recent Awards •
All
Popular Question
to
wangziwei0010
▴ 30
Popular Question
to
xiaoleiusc
▴ 140
Popular Question
to
odi
▴ 10
Popular Question
to
Alewa
▴ 170
Popular Question
to
Ezequiel
▴ 10
Popular Question
to
pablo
▴ 310
Popular Question
to
Jichen Wen
▴ 30
Recent Replies
Answer: Compare Two Sigle-cell Sample for Differentially Expressed Genes (DEGs). How?
by
ATpoint
85k
> But How could I know if the difference comes from sample instead of sequencing runs or cohort-driven batch effect? You cannot. It's pe…
Comment: Comparing GSEA mutant data to wild type
by
conmul
• 0
Sorry that it was unclear in the post. The data is all CRISPR gene effect scores from DepMap. The 'significant genes' as mentioned in the p…
Comment: How to determine whether it is 10x data
by
king
• 0
Thank you for your answer, it's very inspiring.
Comment: Inquiry about depth of coverage and copy number variation
by
Chen
• 0
Thanks Pierre, I was actually thinking about the duplicate PCR reads and didn't explain it properly. I have found a post mentioning that qu…
Comment: Can a read be aligned more than once?
by
GenoMax
146k
Yes a read can be aligned more than once (I don't specifically know about gam/gaf). It would be called a "multi-mapping" read. You could im…
Comment: Statistical test to be used for dataset
by
allingt
• 0
The choice of test depends on the types of variables involved and the hypothesis you have. But most importantly on the question you want am…
Comment: dittoHeatmap; adding column labels on the heatmap
by
jared.andrews07
★ 18k
I'd consider making a [block annotation](https://jokergoo.github.io/ComplexHeatmap-reference/book/heatmap-annotations.html#block-annotation…
Comment: Comparing GSEA mutant data to wild type
by
allingt
• 0
What do you mean by "significant gene"? How did you perform GSEA and on how did you rank your genes for it? From guesswork I might initiall…
Comment: Genes of Interest in a Multi-Tissue Analysis
by
allingt
• 0
The DESeq2 manual tells us that the object class of vst() output is a subclass of RangedSummarizedExperiment. I suspect the methods applica…
Comment: WGCNA: Why are my brown, yellow, and other modules not visible in the gene dendr
by
allingt
• 0
Did you perform blockwise module detection by any chance? Are your results object's contents sorted in blocks?
Comment: Why does WGCNA use weighted correlation instead of Pearson correlation?
by
allingt
• 0
The WGCNA implementation by Langfelder and Horvath provides various correlation methods to create the initial correlation matrix. I don't t…
Comment: dittoHeatmap; adding column labels on the heatmap
by
Varun Gupta
★ 1.3k
any idea, how can I display the labels Pre and POst on the top of the heatmap? I am looking at complexheatmap package as to how they displa…
Comment: How can I determine the p-value of genes within each identified module in WGCNA?
by
allingt
• 0
What p-value do you mean? When and how did you calculate it?
Answer: What is a genomic range that would almost always get decent WGS coverage but is
by
i.sudbery
20k
What about some of the well known enhancer regions, the globin locus LCR? Likely to be highly sequenceable, and yet not on exome panels.
Answer: Using NumReads column of quants.genes.sf file to build DESeq2 input
by
i.sudbery
20k
One of the improvements that the using the `salmon` -> `tximport` -> `DESeq2` pipeline, over just a `counts`->`DESeq2` pipeline is the abil…
Traffic: 1453 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6