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Showing top results for tag: Data-Analysis • reset
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News: A Practical Hands-On Introduction to R
Tidyverse R Data-Visualisation Data-Analysis ggplot2
updated 12 weeks ago by • 0 • written 12 weeks ago by ★ 2.6k
0
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0
replies
328
views
Job: Available Bioinformatics PhD Position at the Med Uni Graz, Austria
Data-Analysis PhD Transcriptomics Medicine
updated 12 weeks ago by 44k • written 12 weeks ago by • 0
0
votes
0
replies
242
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News: upcoming online statistical courses
Statistics R Data-Analysis
updated 6 months ago by 44k • written 6 months ago by ★ 2.6k
0
votes
2
replies
435
views
Statistical Advice Needed for RNAseq Data Analysis
Statistical-Significance Genomics RNA-seq Data-Analysis
updated 6 months ago by 44k • written 6 months ago by • 0
33
votes
12
replies
2.1k
views
7 follow
Forum: Nextflow and self-made pipelines opinion
nextflow pipeline data-analysis
8 months ago by karlaarz ▴ 110
0
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0
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426
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News: Practical Hands-On Introduction to R course
R Tidyverse Data-Analysis
updated 10 months ago by 44k • written 10 months ago by ★ 2.6k
0
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0
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515
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News: Course - Metabolomics in R/Bioconductor
R Data-Analysis Metabolomics Bioconductor
updated 13 months ago by 44k • written 13 months ago by ★ 2.6k
1
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7
replies
4.4k
views
7 follow
RNA-Seq analysis with Python
python RNA-Seq data-analysis
updated 15 months ago by ▴ 140 • written 3.9 years ago by ▴ 50
0
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0
replies
710
views
Job: Bioinformatics Specialist/Data Science Specialist
NGS data-analysis
updated 20 months ago by 44k • written 20 months ago by • 0
0
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1
reply
550
views
News: Research Training In NGS Data Analysis
analysis data-analysis
updated 23 months ago by 44k • written 23 months ago by • 0
4
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1
reply
760
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News: Online Course - A Practical Introduction to NGS Data Analysis (September 26-28, 2022)
workshop ngs data-analysis
updated 2.3 years ago by 44k • written 2.3 years ago by 11k
3
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1
reply
786
views
Forum: Would an automated NGS analytics platform help research?
ngs data-analysis
updated 2.3 years ago by 44k • written 2.3 years ago by • 0
0
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0
replies
410
views
How to analyze the mirbase mature sequence aligned miRNA output file
mirbase NGS miRNA data-analysis ncbi-blast
updated 2.3 years ago by 44k • written 2.3 years ago by ▴ 10
1
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0
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501
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News: Data analysis with the Tidyverse in July (18th-21st).
Visualization R Tidyverse data-analysis
updated 2.3 years ago by 44k • written 2.3 years ago by ★ 2.6k
4
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12
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2.5k
views
Hi everyone. I want to know how to analysis genes data by using "Welch t test, Wilcoxon Mann Whitney test(WMW) and Significance of Analysis Microarra…
Genes parametric data-analysis
updated 2.3 years ago by 44k • written 2.4 years ago by • 0
0
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3
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1.0k
views
Forum: Project Topics on bioinformatic
Data-analysis Coding Molecular-biology
updated 17 months ago by 44k • written 2.7 years ago by • 0
0
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0
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775
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Job: Bioinformatics Research Scientist – Mass Spectrometry Bioinformatics
data-analysis mass-spectrometry R
updated 21 months ago by 44k • written 2.7 years ago by ▴ 20
1
vote
0
replies
613
views
Job: Postdoctoral Researcher – Synthetic data generation in digital pathology (R2)
HPC Data-Analysis AI
updated 21 months ago by 44k • written 2.7 years ago by ▴ 20
0
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0
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522
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News: Bioinformatics Analysis
Transcriptome genome data-analysis
updated 21 months ago by 44k • written 2.9 years ago by • 0
0
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0
replies
532
views
News: UC Davis Bioinformatics Core Workshops
data-analysis
updated 21 months ago by 44k • written 3.0 years ago by • 0
0
votes
2
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887
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Tools or Method for batch analysis of Paired end WES data in a queue way.
Pipeline Queue Batch Exome Data-Analysis
updated 2.4 years ago by 44k • written 3.1 years ago by ▴ 20
0
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1
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796
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using a singualrity application ARGs-OAP
Data-Analysis WholeShotgunMetagenome AMR Microbiome Metagenomics
updated 3.3 years ago by 85k • written 3.3 years ago by • 0
0
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0
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691
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hclust2.py heatmap in MetaPhlAn3 --ftop features
MetaPhlAn3 Data-Analysis WholeShotgunMetagenome Microbiome Metagenomics
3.3 years ago by serene.s • 0
1
vote
2
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1.3k
views
FastQC report of the metagenomic data
Metagenomics Microbiome WholeShotgunMetagenome FastQC Data-Analysis
3.4 years ago by serene.s • 0
0
votes
3
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889
views
top 25 species from all sample datasets
Metagenomics Data-Analysis WholeShotgunMetagenome Microbiome
updated 3.4 years ago by ★ 1.6k • written 3.4 years ago by • 0
1
vote
0
replies
896
views
Job: Postdoctoral fellow -- genetic/molecular epidemiology
multiomics data-analysis
updated 16 months ago by 44k • written 3.7 years ago by ▴ 10
0
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0
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1.2k
views
Job: Bioinformatician or postdoctoral researcher
data-analysis NGS human-genetics
updated 17 months ago by 44k • written 4.0 years ago by • 0
9
votes
7
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1.4k
views
Which tool is best for getting genomic data analysis?
hail.is genome data-analysis next-gen
updated 16 months ago by 44k • written 4.4 years ago by ▴ 20
1
vote
3
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861
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Genomic data analysis - Beginner
genome data-analysis
updated 19 months ago by 44k • written 4.4 years ago by ▴ 20
0
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0
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795
views
News: Training in Rosetta for Molecular Modeling and Design @NIH,June 22-25,2020
Data-analysis Modeling RNA-Seq Molecular-design
updated 17 months ago by 44k • written 4.5 years ago by ▴ 140
0
votes
0
replies
775
views
News: Intermediate Python for Bioinformatics 2020
python data-analysis
updated 17 months ago by 44k • written 4.5 years ago by • 0
0
votes
0
replies
949
views
News: Training in Metagenomics Data Analysis, May 26-29,2020
training Metagenomics next-gen Data-analysis
updated 17 months ago by 44k • written 4.5 years ago by ▴ 140
0
votes
0
replies
1.7k
views
Job: Research scientist in bioinformatics, Sweden
postdoc data-analysis cancer
updated 17 months ago by 44k • written 4.7 years ago by ▴ 10
0
votes
0
replies
1.2k
views
Job: Genomic Data Analysis - Bioinformatician
Data-Analysis Bioinformatician Biology
updated 17 months ago by 44k • written 4.8 years ago by ▴ 30
8
votes
2
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969
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News: Save time and money through improved onboarding of your NGS data scientists
NGS data-analysis
updated 19 months ago by 44k • written 4.8 years ago by 11k
1
vote
0
replies
916
views
News: Training in Metagenomics Data Analysis @ NIH,February 10-13,2020
Metagenomics Biomedical next-gen Data-analysis
updated 17 months ago by 44k • written 4.8 years ago by ▴ 140
0
votes
0
replies
1.0k
views
News: NGS Data Analysis Training for Researchers - March 25-27 in Munich
NGS data-analysis training workshop
updated 17 months ago by 44k • written 4.8 years ago by 11k
0
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0
replies
896
views
News: EMBL Course: Analysis and Integration of Transcriptome and Proteome Data
Data-analysis Proteomics Transcriptomics
updated 17 months ago by 44k • written 5.0 years ago by ▴ 20
0
votes
0
replies
1.3k
views
News: EMBL Course: Quantitative Proteomics: Strategies and Tools to Probe Biology
Data-analysis Proteomics
updated 17 months ago by 44k • written 5.0 years ago by ▴ 20
0
votes
0
replies
857
views
News: EMBL Course: Exploratory Analysis of Biological Data: Data Carpentry
Data-Analysis Exploratory-Analysis Biological-Data
updated 17 months ago by 44k • written 5.0 years ago by ▴ 20
1
vote
0
replies
2.1k
views
Job: Research Scientist Bioinformatics at Evotec (Goettingen, Germany)
data-analysis multi-omics RNA-Seq Proteomics
updated 17 months ago by 44k • written 5.1 years ago by ★ 1.4k
0
votes
0
replies
2.0k
views
Job: PhD Student position in Systems Biology and Bioinformatics @ UAB (Birmingham, AL)
Networks data-analysis RNA-Seq
updated 17 months ago by 44k • written 5.2 years ago by • 0
0
votes
0
replies
1.5k
views
Job: Job opportunity at EMBL: Biological Data Analyst - Statistician
biostatistics data-analysis statistician
updated 17 months ago by 44k • written 5.2 years ago by ▴ 30
0
votes
0
replies
740
views
How should I be getting the significance of genetic drift in a SNP?
R statistics data-analysis genetic-drift p-value
5.2 years ago by matthew.dambrosio.1 • 0
0
votes
0
replies
822
views
News: Training in Creating Plots, Graphs and Maps using R @ NIH
Biomedical next-gen Data-analysis
updated 17 months ago by 44k • written 5.2 years ago by ▴ 140
8
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0
replies
1.3k
views
News: Final Call - Hands-On RNA-Seq Data Analysis Workshop - only 2 seats left
data-analysis RNA-Seq workshop
updated 17 months ago by 44k • written 5.3 years ago by 11k
0
votes
0
replies
1.6k
views
Job: Applications Scientist, Data Science - Pleasanton, CO
data-analysis genome next-gen genomics
updated 17 months ago by 44k • written 5.4 years ago by • 0
0
votes
0
replies
1.6k
views
Job: Applications Scientist, Data Science - Boulder, CO
data-analysis genome next-gen genomics
updated 17 months ago by 44k • written 5.4 years ago by • 0
0
votes
0
replies
1.3k
views
News: Training in Bioinformatics for Beginners @NIH, June 11-14,2019
data-analysis omics ngs biomedical training
updated 17 months ago by 44k • written 5.6 years ago by ▴ 140
0
votes
0
replies
1.3k
views
Job: Post-doctoral fellowship in microRNA systems biology
Data-analysis microRNA
updated 17 months ago by 44k • written 5.7 years ago by ▴ 60
50 results • Page 1 of 1
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Comment: Finding Differential Phosphosites in TMT Phosphoproteomics Data
Answer: Compare Two Sigle-cell Sample for Differentially Expressed Genes (DEGs). How?
How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
A: How do I ask a question on Biostars?
Answer: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
Answer: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
Answer: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
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Comment: Magnesium ion in a post-docking adjustment by dthorbur ★ 2.5k
[`AlphaFold3`](https://alphafoldserver.com/) (assuming you're not at conflict with their terms of use) can handle both ligands and ions. An…
Answer: Compare Two Sigle-cell Sample for Differentially Expressed Genes (DEGs). How? by ATpoint 85k
> But How could I know if the difference comes from sample instead of sequencing runs or cohort-driven batch effect? You cannot. It's pe…
Comment: Comparing GSEA mutant data to wild type by conmul • 0
Sorry that it was unclear in the post. The data is all CRISPR gene effect scores from DepMap. The 'significant genes' as mentioned in the p…
Comment: How to determine whether it is 10x data by king • 0
Thank you for your answer, it's very inspiring.
Comment: Inquiry about depth of coverage and copy number variation by Chen • 0
Thanks Pierre, I was actually thinking about the duplicate PCR reads and didn't explain it properly. I have found a post mentioning that qu…
Comment: Can a read be aligned more than once? by GenoMax 146k
Yes a read can be aligned more than once (I don't specifically know about gam/gaf). It would be called a "multi-mapping" read. You could im…
Comment: Statistical test to be used for dataset by allingt • 0
The choice of test depends on the types of variables involved and the hypothesis you have. But most importantly on the question you want am…
Comment: dittoHeatmap; adding column labels on the heatmap by jared.andrews07 ★ 18k
I'd consider making a [block annotation](https://jokergoo.github.io/ComplexHeatmap-reference/book/heatmap-annotations.html#block-annotation…
Comment: Comparing GSEA mutant data to wild type by allingt • 0
What do you mean by "significant gene"? How did you perform GSEA and on how did you rank your genes for it? From guesswork I might initiall…
Comment: Genes of Interest in a Multi-Tissue Analysis by allingt • 0
The DESeq2 manual tells us that the object class of vst() output is a subclass of RangedSummarizedExperiment. I suspect the methods applica…
Comment: WGCNA: Why are my brown, yellow, and other modules not visible in the gene dendr by allingt • 0
Did you perform blockwise module detection by any chance? Are your results object's contents sorted in blocks?
Comment: Why does WGCNA use weighted correlation instead of Pearson correlation? by allingt • 0
The WGCNA implementation by Langfelder and Horvath provides various correlation methods to create the initial correlation matrix. I don't t…
Comment: dittoHeatmap; adding column labels on the heatmap by Varun Gupta ★ 1.3k
any idea, how can I display the labels Pre and POst on the top of the heatmap? I am looking at complexheatmap package as to how they displa…
Comment: How can I determine the p-value of genes within each identified module in WGCNA? by allingt • 0
What p-value do you mean? When and how did you calculate it?
Answer: What is a genomic range that would almost always get decent WGS coverage but is by i.sudbery 20k
What about some of the well known enhancer regions, the globin locus LCR? Likely to be highly sequenceable, and yet not on exome panels.
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