Protein Graph Library

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

a JavaScript DNA, RNA, and protein sequence viewer

🔬 ♌ Bacterial ribosomal RNA predictor

Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement

Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads

With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...

🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs @ http://rna-tools.rtfd.io web @ http://rna-tools.online

RNA-seq analysis pipeline for detection of gene-fusions

Identification of differential RNA modifications from nanopore direct RNA sequencing

🔬📚 Galaxy Tool wrappers

Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.

ABRA2

nucleic acid folding

RiboNucleic Acid (RNA) Language Model

Visualise RNA secondary structure in consistent, reproducible and recognisable layouts

Precision HLA typing from next-generation sequencing data

A course on genomics and bioinformatics from WU

Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences