Here are
15 public repositories
matching this topic...
TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data
Updated
Jan 26, 2023
Python
Automated pipeline for amplicon sequence analysis
Updated
Oct 20, 2024
Python
Creates a simple OTU table from Kraken2 report.
Updated
Oct 15, 2024
Python
Functions and workflows for the analysis of microbiome data.
Updated
Jun 6, 2023
Julia
MSc - 16S sequence datasets, amplicon analysis, and stats
microbiome analysis of ant colonies
Updated
Nov 6, 2018
Shell
This bash script is used to generate a one page KRONA html from a rarified multi samples OTU table.
Updated
May 28, 2018
Shell
Former version of METAPIPE
Updated
May 9, 2024
Shell
Silva OTU count table merger
Updated
Nov 14, 2022
Perl
Repository for the Exam project of group 12 in the course "R for bio datascience".
microbiome analysis of ant colonies
Updated
May 4, 2018
Shell
DGRPy is a python package for DGRP microbiome data analysis
Updated
Jun 28, 2021
Python
Next Generation Phylogenetic Microbiome Analysis Framework
Updated
Apr 23, 2022
Python
Multidimensional Scaling for OTU abundance tables and implementation to ggplot
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