The TemplateFlow Archive - A DataLad super-dataset
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Apr 15, 2024
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mri-brain
Here are 95 public repositories matching this topic...
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Dec 23, 2021 - Jupyter Notebook
3D Visualization of Brain MRI
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Dec 20, 2024 - R
Computational Anatomy Toolbox for SPM12 or SPM25
matlab visualisation computational-neuroscience statistical-analysis surface-reconstruction neuroimaging cortical-surfaces cortical-thickness mri-brain gyrification mri-segmentation surface-registration mri-brain-segmentation voxel-based-morphometry
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Dec 7, 2024 - MATLAB
Federated learning with homomorphic encryption enables multiple parties to securely co-train artificial intelligence models in pathology and radiology, reaching state-of-the-art performance with privacy guarantees.
deep-learning pytorch medical-imaging image-classification segmentation image-segmentation mri-images homomorphic-encryption differential-privacy medical-image-analysis federated-learning mri-brain mri-segmentation pysyft federated-learning-framework
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Dec 7, 2023 - Python
A workflow to allow Freesurfer recon-all to run on brain image with gliomas
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Jun 17, 2024 - Shell
The following is a new architecture for robust segmentation. It may perform better than a U-Net :) for binary segmentation. I will update the code when I have some spare time within the next month. However you can simply read this one and will soon notice the pattern after a bit
unet-image-segmentation miccai-2018 comp-net complementary-segmentation-network mri-brain invariant-to-large-distortions state-of-art-general-segmentation
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Jul 12, 2021 - Python
Neural network-based preprocessing of MRI data: Prepping brain images in seconds 🔥
python deep-learning neuroimaging segmentation brain-extraction skull-stripping mri-brain mri-segmentation voxel-based-morphometry
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Nov 7, 2024 - Python
Transformer-based Models for Unsupervised Anomaly Segmentation in Brain MR Images
python deep-neural-networks deep-learning transformers medical-imaging reconstruction autoencoders flair latent-variable-models mri-brain unsupervised-deep-learning anomaly-detection-models anomaly-segmentation miccai2022 brainles22-workshop
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Sep 7, 2024 - Python
An Open-Source End-to-End Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia
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Aug 19, 2024 - Julia
Codebase for Conditioned Diffusion Models for Unsupervised Anomaly Detection
deep-learning unsupervised-learning anomaly-detection domain-adaptation mri-brain brats-dataset diffusion-models unsupervised-anomaly-detection conditioned-diffusion-models
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Nov 1, 2024 - Python
A Matlab toolbox for examining the quality of structural (SNR) and functional (tSNR, SFNR) MRI
quality quality-control mri quality-assurance fmri mri-images matlab-toolbox quality-metrics quality-measures mri-signals quality-check fmri-preprocessing fmri-data-analysis fmri-data mri-brain mri-data tsnr convert-dicoms
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Apr 1, 2020 - MATLAB
Javascript engine for 3D brain model (used by RAVE project)
neuroscience mri mri-images webgl2 ecog freesurfer ieeg seeg mri-brain electrode-localization nifti-viewer
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Nov 1, 2024 - JavaScript
This Machine Learning course project is on 3D MRI image analysis for Alzheimer's disease prediction. Transfer Learning is used for classification and analysis of images.
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Jun 30, 2021 - Jupyter Notebook
A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.
segment paint gui deep-neural-networks mri segmentation deeplearning convolutional-neural-networks mri-images brain biomedical biomedical-image-processing brain-imaging u-net mri-applications mri-brain mri-segmentation paint-for-brains paint4brains mri-brain-segmentation
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Jan 13, 2021 - Python
A toolbox for NIfTI and Analyze medical image visualization, editing, and 3D rendering
data-visualization toolbox mri fmri mri-images matlab-toolbox 3d-printing 3d-graphics fmri-image-slices fmri-data-analysis mri-brain fmri-analysis image-visualization
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Aug 30, 2020 - MATLAB
mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance
qa quality-control neuroscience mri neuroimaging quality-assurance mri-images brain ismrm mr-image mri-brain niqc
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May 8, 2024 - Python
Official implementation of the paper "Challenging Current Semi-Supervised Anomaly Segmentation Methods for Brain MRI" accepted to the MICCAI 2021 BrainLes workshop
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Oct 13, 2021 - Python
Non-parametric T2 relaxometry methods for myelin water quantification
distribution myelin tikhonov-regularization relaxometry mri-brain myelin-water-fraction non-negative-least-squares t2-relaxometry regularized-nnls multi-echo-t2 myelin-water-imaging
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Sep 7, 2023 - Python
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