metagenome-binning

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Here are 3 public repositories matching this topic...

mx-ethan-rao / deepmetabin

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A graph-based Gaussian Mixture Variational Autoencoder improves metagenome binning for short contigs

graph clustering gaussian-mixture-models variational-autoencoder pytorch-lightning metagenome-binning

Updated Sep 9, 2023
Python

paleobiotechnology / EMN001_Paleofuran

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Repository for data, code & figures related to the publication: "Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic"

genome-assembly adna natural-products biosynthetic-gene-clusters ancient-dna paleolithic dental-calculus metagenome-binning genome-reconstruction chlorobium paleobiotechnology paleofuran heterologous-gene-expression

Updated Apr 22, 2024
Python

hildebra / clusterMAGs

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clutering of MAGs (metagenome assembled genomes) into MGS (metagenomic species)

metagenome metagenome-assembled-genomes metagenome-binning

Updated Dec 8, 2023
C++

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metagenome-binning

Here are 3 public repositories matching this topic...

mx-ethan-rao / deepmetabin

paleobiotechnology / EMN001_Paleofuran

hildebra / clusterMAGs

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