Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans

RAPToR (Real Age Prediction from Transcriptome staging on Reference) is a tool to accurately predict individual samples' developmental age from their gene expression profiles.

Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database WormBase

Research software for (semi-) automated detection and identification of neurons in images of NeuroPAL, extract ID’d neural activity traces from NeuroPAL;GCaMP animals, and upload these datasets to public repositories. DOI: 10.1016/j.cell.2020.12.012

Web-based Interfaces for Virtual C. elegans Neuron Model Definition, Network Configuration, Behavioural Experiment Definition and Experiment Results Visualisation

This is a simulation for creating a worm that find it's food using two neurons.

利用投影仪实时定点照射显微镜视野

Bioinformatic analysis of gene expression microarray profiles and DGEs on R and R studio

Annotating wurms!

Newtonian mechanics model for C. elegans locomotion

Detect and analyze Network Motifs of any network, with Python.

WormRuler: A video analysis software to analyze body length of Caenorhabditis elegans

Tracking C. Elegans in a 3D environment (Computer vision)

An Expressive ORM for NodeJS.

Track C. elegans