Scorecard Development in python, 评分卡

Optimal binning: monotonic binning with constraints. Support batch & stream optimal binning. Scorecard modelling and counterfactual explanations.

Assembly and binning of metagenomes

Scorecard Development in R, 评分卡

Find nearby 3D objects in constant time O(1).

✨🧬 Refined binning of metagenomic contigs using assembly graphs

A hybrid assembly and MAG recovery pipeline (and more!)

🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs

A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

Autometa: Automated Extraction of Genomes from Shotgun Metagenomes

An algorithm for creating user configurable, variable-precision sliding windows of time. Useful for binning time values in large collections of data.

pure Julia package for optimal histogram binning, based on piecewise constant model.

A Community Tool for Transiting Exoplanet Science with the JWST & HST

☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs

Improving genome bins through the combination of different binning programs

BinaRena: Interactive Visualization and Binning of Metagenomic Contigs

Bayesian histograms for estimation of binary rare event rates, with fully automated bin pruning 📊

Repository of our application for human-augmented binning

AMBER: Assessment of Metagenome BinnERs

Rapid and simple taxonomic profiling of genome and metagenome contigs