1 Pull request merged by 1 person

• Allow BYTE_ARRAY_STOP to work on non-zero STOP code with TOK3.

  #1871 merged Jan 8, 2025

2 Issues closed by 2 people

• multithreaded reading of BAM/CRAM

  #1867 closed Jan 11, 2025

• [Tabix] Unexpected chunk virtual offsets with more than >1 chunk bins

  #1864 closed Jan 9, 2025

1 Issue opened by 1 person

• Phased GT encoding

  #1872 opened Jan 8, 2025

5 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• update to work with vcf 4.4 prefixed phasing info

  #1861 commented on Jan 14, 2025 • 7 new comments

• update to use htsFile in synced reader (for #1862)

  #1868 commented on Jan 14, 2025 • 6 new comments

• Inconsistency in parsing `@SQ` headers with multiple LN: and SN: tags

  #1866 commented on Jan 9, 2025 • 0 new comments

• Add option to disable periodic `hflush` during multithreaded writes?

  #1869 commented on Jan 9, 2025 • 0 new comments

• Typo in `vcf.h`

  #1870 commented on Jan 13, 2025 • 0 new comments