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Add fileset folder creation #427

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Add fileset folder creation #427

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0a0256e
Add fileset folder creation
Rdornier Aug 30, 2024
fb11dc0
fix backward compatibility issue raised by sbesson
Rdornier Sep 26, 2024
ba7d9cc
Adding insert_fileset_param to the calling method
Rdornier Oct 1, 2024
dd7654c
remove unused imports
Rdornier Oct 1, 2024
ed3c684
Use action store_true instead of default arg
Rdornier Oct 3, 2024
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fix backward compatibility issue raised by sbesson
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@Rdornier
Rdornier committed Sep 26, 2024
commit fb11dc0ca13c6ba885e09d623e2ccc05f5fa9b65
5 changes: 3 additions & 2 deletions src/omero/plugins/download.py
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Original file line number Diff line number Diff line change
Expand Up @@ -87,10 +87,11 @@ def __call__(self, args):
# only expect single file
self.download_file(client, orig_file, target_file)

def download_fileset(self, conn, fileset, dir_path):
def download_fileset(self, conn, fileset, dir_path, insert_fileset_folder=False):
self.ctx.out(f"Fileset: {fileset.id}")
template_prefix = fileset.getTemplatePrefix()
dir_path = os.path.join(dir_path, f"Fileset_{fileset.id}")
if insert_fileset_folder:
dir_path = os.path.join(dir_path, f"Fileset_{fileset.id}")
for orig_file in fileset.listFiles():
file_path = orig_file.path.replace(template_prefix, "")
target_dir = os.path.join(dir_path, file_path)
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