correction of version 1.03 again

fortune9 · May 28, 2015 · 1133fcc · 1133fcc
1 parent 6e68cf8
commit 1133fcc
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diff --git a/MANIFEST b/MANIFEST
@@ -11,6 +11,7 @@ lib/Bio/CUA/CUB/Builder.pm
 lib/Bio/CUA/Seq.pm
 lib/Bio/CUA/SeqIO.pm
 lib/Bio/CUA/Summarizer.pm
+lib/Bio/CUA/Tutorial.pod
 LICENSE
 MANIFEST			This list of files
 README

diff --git a/lib/Bio/CUA/Tutorial.pod b/lib/Bio/CUA/Tutorial.pod
@@ -119,9 +119,9 @@ To calculate CAI, tAI, Fop, and ENC for all the CDS sequences, run
 Note we use the options I<-t>, I<-c>, I<-f>, and I<-e> to specify the
 needed parameters for calculating tAI, CAI, Fop, and ENC.
 
-=head1 CAI and ENC variants
+=head2 CAI and ENC variants
 
-=head2 CAI variants
+=head3 CAI variants
 
 I devise two variants of CAI to fix the shortcoming of the standard
 CAI. Their calculations are below.
@@ -167,7 +167,7 @@ Note I feed the option I<-c> the codon-level bCAI file
 F<codon_CAI.by_background.S2_cell>. I also use the option I<--lite>
 to suppress the program to compute other auxiliary information.
 
-=head2 ENC variants
+=head3 ENC variants
 
 Including the standard ENC, thare are four variants, defined by whether
 nucleotide compositions are corrected and on how missing F values are