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Makefile
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#------------------------------------------------------------------------
#
# Copyright (C) 1985-2020 Georg Umgiesser
#
# This file is part of SHYFEM.
#
#------------------------------------------------------------------------
#---------------------------------------------------------------
#
# general makefile for shyfem base directory
#
#---------------------------------------------------------------
#---------------------------------------------------------------
#
# targets that should be in all Makefiles of SUBDIRS:
#
# fem clean cleanall
#
#---------------------------------------------------------------
DIR = fem
RULES_MAKE_VERSION = 0.0 # default if Rules.make cannot be read
FEMDIR = .
FEMBIN = $(FEMDIR)/fembin
#---------------------------------------------------------------
include ./Rules.make
#---------------------------------------------------------------
RULES_MAKE_EXPECTED = 1.10
RULES_MAKE_COMPATIBILITY = RULES_MAKE_OK
ifneq ($(RULES_MAKE_VERSION),"0.0")
ifneq ($(RULES_MAKE_VERSION),$(RULES_MAKE_EXPECTED))
RULES_MAKE_COMPATIBILITY = RULES_MAKE_NOT_COMPATIBLE
endif
endif
useX11 = false
useX11 = true
#---------------------------------------------------------------
ifndef ($(SHYFEMDIR))
SHYFEMDIR := $(HOME)/shyfem
endif
export SHYFEMDIR
#---------------------------------------------------------------
FEMDIR = .
DIRLIB = $(FEMDIR)/femlib
FEMSRC = $(FEMDIR)/fem3d
FEMBIN = $(FEMDIR)/fembin
TMPDIR = $(HOME)/fem/tmp
ACTFEMDIR = `pwd`
REGRESSDIR = femregress
SUBDIRS = `ls -dF * | grep '/' | sed -e 's/\///'`
FEMLIBS = femcheck post hcbs
FEMGRID = grid
FEMMESH = mesh
FEMPROG = fem3d femplot femadj
FEMUTIL = $(REGRESSDIR) femdoc fembin femlib femanim
FEMOPT = femgotm femersem
FEMEXTRA =
PARAMDIRS = fem3d femplot femadj #femspline
ifeq ($(useX11),false)
FEMGRID =
endif
SPECIAL = Makefile Rules.make README CHANGES
SPECIAL = Makefile Rules.make \
BUG COMMIT FAQ LOG README VERSION
VERSION = `head -1 $(FEMDIR)/VERSION | sed -e 's/ */ /g' | cut -f4 -d" "`
COMMIT = `head -1 $(FEMDIR)/VERSION | sed -e 's/ */ /g' | cut -f5 -d" "`
VERSNAME = `head -1 $(FEMDIR)/VERSION | sed -e 's/ */ /g' | cut -f4 -d" " | sed -e 's/VERS_//'`
DATE = `date "+%F"`
TARNAME = $(VERSION)
BETANAME = $(VERSNAME)_beta_$(DATE)
TARDIR = $(TMPDIR)/fem_$(TARNAME)
BETADIR = $(TMPDIR)/shyfem-$(BETANAME)
#---------------------------------------------------------------
FEMTOTS = $(FEMLIBS) $(FEMGRID) $(FEMMESH) $(FEMPROG) $(FEMUTIL) $(FEMOPT)
ifeq ($(GOTM),true)
SUBDIRS +=
FEMEXTRA += femgotm
endif
ifeq ($(ECOLOGICAL),ERSEM)
SUBDIRS += femersem/src
FEMEXTRA += femersem/src
endif
FEMDIRS = $(FEMLIBS) $(FEMEXTRA) $(FEMGRID) $(FEMMESH) $(FEMPROG) $(FEMUTIL)
FEMNOGRAPH = $(FEMLIBS) $(FEMEXTRA) $(FEMMESH) $(FEMPROG) $(FEMUTIL)
.IGNORE: clean
.PHONY: publish version stable
#---------------------------------------------------------------
# compiling and recursive targets
#---------------------------------------------------------------
default:
@echo " shyfem - version $(VERSION) $(COMMIT)"
@echo ' run "make help" for more information'
@echo ' if you are new to shyfem run "make first_time"'
all: fem doc
@cd fem3d; make compatibility
fem: checkv directories links test_executable check_server check_compiler
@$(FEMBIN)/recursivemake $@ $(FEMDIRS)
@femcheck/check_compilation.sh -quiet
para_get:
@cd fempara; ./para_get.sh $(PARADIR)
para_compile:
@cd fempara; ./para_setup.sh $(PARADIR)
#@cd $(PARADIR)/src; make clean; make lib
@cd $(PARADIR)/src; make lib
para_clean:
@cd $(PARADIR)/src; make clean
bfm_compile: check_server
@fembfm/bfm_compile.sh $(BFMDIR) $(FORTRAN_COMPILER)
bfm_clean:
@fembfm/bfm_compile.sh -clean $(BFMDIR)
nograph: checkv directories links test_executable
@$(FEMBIN)/recursivemake fem $(FEMNOGRAPH)
@femcheck/check_compilation.sh -quiet -nograph
docs: doc
doc:
@cd femdoc; make doc
dirs:
@echo "listing subdirectories (first level)"
@echo $(SUBDIRS)
dirf:
@echo "listing femdirectories (first level)"
@echo $(FEMDIRS)
list:
@$(FEMBIN)/recursivemake $@ $(FEMDIRS)
depend:
@$(FEMBIN)/recursivemake $@ $(FEMDIRS)
directories:
@-mkdir -p tmp arc
@-mkdir -p $(HOME)/tmp
@-mkdir -p femlib/mod
@if [ ! -f ./tmp/Makefile ]; then cp ./femdummy/Makefile ./tmp; fi
@if [ ! -f ./arc/Makefile ]; then cp ./femdummy/Makefile ./arc; fi
links:
@-rm -fr bin lib
@-ln -sf fembin bin
@-ln -sf femlib lib
@if [ ! -d ./femregress ]; then ln -fs femdummy femregress; fi
ctags:
@echo "making tags file..."
ctags -R .
#---------------------------------------------------------------
# cleaning
#---------------------------------------------------------------
cleanlocal:
-rm -f fem.tar fem.tar.gz
-rm -f changed_zip.zip
-rm -f *~
-rm -f *.tmp *.bak *.out
-rm -f *.revnew
-rm -f ggg hhh
-rm -f errout.dat a.out plot.ps
-rm -f .memory
clean: cleanlocal
$(FEMBIN)/recursivemake $@ $(SUBDIRS)
cleanall: cleanlocal cleanregress
$(FEMBIN)/recursivemake $@ $(SUBDIRS)
cleandist: cleanall
cleanregress:
if [ -d $(REGRESSDIR) ]; then cd $(REGRESSDIR); make cleanall; fi
cleanbck:
-rm -rf *.bck
#---------------------------------------------------------------
# public commands
#---------------------------------------------------------------
help:
@echo "help this screen"
@echo "help_dev more help for developers"
@echo "first_time what to do for the first time"
@echo "install installs the model"
@echo "configure configures the model"
@echo "fem compiles everything"
@echo "bfm_compile sets up BFM module"
@echo "nograph compiles everything except graphics"
@echo "compat compiles compatibility routines"
@echo "doc makes documentation"
@echo "all compiles everything and makes documentation"
@echo "clean, cleanall cleans installation from tmp and obj files"
@echo "version returns version of this distribution"
@echo "info general options from Rules.make"
@echo "check_software checks needed software"
@echo "check_compilation checks if all executables have compiled"
@echo "changed finds files changed after installation"
@echo "changed_zip zips files changed after installation"
first_time: links
@echo 'Recommended use if you see shyfem for the first time:'
@echo ' make help gives overview of possible commands'
@echo 'Commands to run only for the first time:'
@echo ' make check_software checks availability of software'
@echo ' make configure configures the use of the model'
@echo ' make install installs the model'
@echo ' make fem compiles the model'
@echo 'Commands to run everytime you change something in the model:'
@echo ' make cleanall cleans directories'
@echo ' make fem compiles the model'
version:
@echo $(VERSION) $(COMMIT)
tag:
@echo $(VERSION)
info: version
@echo "general:"
@echo " version = $(VERSNAME)"
@echo " DISTRIBUTION_TYPE = $(DISTRIBUTION_TYPE)"
@echo " SHYFEM directory = $(SHYFEMDIR)"
@echo "macros:"
@echo " COMPILER = $(COMPILER)"
@echo " PARALLEL_OMP = $(PARALLEL_OMP)"
@echo " PARALLEL_MPI = $(PARALLEL_MPI)"
@echo " SOLVER = $(SOLVER)"
@echo " NETCDF = $(NETCDF)"
@echo " GOTM = $(GOTM)"
@echo " ECOLOGICAL = $(ECOLOGICAL)"
@echo "parameters:"
@echo " NKNDIM = $(NKNDIM)"
@echo " NELDIM = $(NELDIM)"
@echo " NLVDIM = $(NLVDIM)"
@echo "compiler:"
@echo " FORTRAN = $(F77)"
@echo " CC = $(CC)"
@echo "compiler options:"
@echo " PROFILE = $(PROFILE)"
@echo " DEBUG = $(DEBUG)"
@echo " OPTIMIZE = $(OPTIMIZE)"
@echo " WARNING = $(WARNING)"
@echo "compiler version:"
@make compiler_version
check: check_software
check_software:
@cd femcheck; ./check_software.sh
configure:
@cd femcheck; ./configure.sh
check_compilation:
@femcheck/check_compilation.sh
modified: changed
changed:
@femcheck/find_changed.sh
changed_zip:
zip changed_zip.zip `femcheck/find_changed.sh`
@echo "changed files have bin zipped to changed_zip.zip"
advance_time:
touch -d "`date -R -r VERSION` + 5 seconds" VERSION
#--------------------------------------------------------
# copyright and revision log
#--------------------------------------------------------
FEMCOPY = $(FEMDIR)/femcheck/copyright
check_files:
@$(FEMCOPY)/copyright.sh -check_all
check_copyright:
@$(FEMCOPY)/copyright.sh -check_rev --updatecopy
update_copyright:
@$(FEMCOPY)/copyright.sh -check_rev --updatecopy --write
#--------------------------------------------------------
# installing
#--------------------------------------------------------
#install: install_hard install_soft
install: install_soft
install_soft: checkv
$(FEMBIN)/shyfem_install_soft.sh
install_hard: checkv
$(FEMBIN)/shyfem_install_hard.sh
uninstall: install_hard_reset install_soft_reset
install_soft_reset: checkv
$(FEMBIN)/shyfem_install_soft.sh -reset
install_hard_reset: checkv
$(FEMBIN)/shyfem_install_hard.sh -reset
#--------------------------------------------------------
# private and admin commands
#--------------------------------------------------------
ggu_help: help_ggu
help_ggu:
@echo "rules_ggu_save saves my Rules.make file"
@echo "rules_ggu_restore restores my Rules.make file"
@echo "rules_nemunas copy Rules.make for nemunas server"
@echo "rules_lagoon copy Rules.make for lagoon"
@echo "rules_carbonium copy Rules.make for carbonium"
@echo "nemon set special treatment nemunas server on"
@echo "nemoff set special treatment nemunas server off"
@echo "git_nemunas enable git for push on nemunas server"
help_dev:
@echo "help_dev this screen"
@echo "test_compile compiles model with different configs"
@#echo "test_stable compiles stable model with different configs"
@echo "regress [np=#] runs regression tests (mpi for np>0)"
@echo "compile_regress compiles model and runs regression tests"
@echo "check_var does various checks on distribution"
@#echo "stable makes stable distribution of last version"
@echo "compiler_version info on compiler"
@echo "last_commit name of last commit"
@echo "dist prepares distribution (Rules.make)"
@echo "rules_save saves actual Rules.make file"
@echo "rules_restore restores last saved Rules.make file"
@echo "rules_dist substitutes Rules.make with Rules.dist file"
@echo "rules_new copies Rules.make file to Rules.dist"
@echo "rules_diff difference between Rules.make and Rules.dist"
@echo "advance_time advances modification time of VERSION"
@echo "make_executable makes scripts executable"
rules:
@echo "rules_save saves actual Rules.make file"
@echo "rules_restore restores last saved Rules.make file"
@echo "rules_dist substitutes Rules.make with Rules.dist file"
@echo "rules_new copies Rules.make file to Rules.dist"
@echo "rules_diff difference between Rules.make and Rules.dist"
test_compile:
@femcheck/test_compile.sh
compile_regress:
@femcheck/test_compile.sh -regress
test_stable:
@femcheck/test_stable.sh
check_var:
@femcheck/check_var.sh
regress:
if [ -d $(REGRESSDIR) ]; then SHYFEMDIR=$(PWD); \
cd $(REGRESSDIR); make regress np=$(np); fi
revision:
$(FEMBIN)/revision_last.sh
test_mpi:
@cd femcheck/parallel; make mpi
#------------------------------------------------------------
rules_save:
mkdir -p arc/rules
cp -f ./Rules.make arc/rules/Rules.save
cp -f femcheck/rules/Rules.dist ./Rules.make
rules_restore:
cp -f arc/rules/Rules.save ./Rules.make
rules_dist:
cp -f femcheck/rules/Rules.dist ./Rules.make
rules_new:
cp -f ./Rules.make femcheck/rules/Rules.dist
rules_diff:
@-diff femcheck/rules/Rules.dist ./Rules.make || true
rules_std:
fembin/rules.sh std
rules_mpi:
fembin/rules.sh mpi
rules_omp:
fembin/rules.sh omp
rules_petsc:
fembin/rules.sh petsc
rules_intel:
fembin/rules.sh intel
#------------------------------------------------------------
dist: cleandist
mkdir -p arc/rules
mv --backup=numbered ./Rules.make arc/rules/Rules.save
cp -f femcheck/rules/Rules.dist ./Rules.make
make doc; make clean
stable:
@stable/make_stable.sh $(FEMDIR)/arc/shyfem-$(VERSNAME).tar.gz
beta: cleanall
date > LASTTAR
echo "$(BETANAME)"
rm -rf $(TMPDIR)/fem.tar $(TMPDIR)/fem_VERS_* $(TMPDIR)/shyfem-*
mkdir -p $(BETADIR)
cp -al $(FEMTOTS) $(SPECIAL) $(BETADIR)
cd $(BETADIR); ./fembin/shyfem_beta.sh
cd $(TMPDIR); tar cvf fem.tar shyfem-*
mv -f $(TMPDIR)/fem.tar .
gzip -f fem.tar
rm -rf $(TMPDIR)/fem.tar $(BETADIR)
mv fem.tar.gz shyfem-$(BETANAME).tar.gz
publish:
@fembin/fempub.sh shyfem_$(TARNAME).tar.gz
compiler_version:
$(F77) $(FINFOFLAGS)
$(CC) $(CINFOFLAGS)
last_commit:
@gittags | tail -1
shyfemdir:
@echo "shyfemdir: $(SHYFEMDIR)"
compat:
@cd fem3d; make compat
#---------------------------------------------------------------
# special targets for ggu
#---------------------------------------------------------------
rules_ggu_save:
mkdir -p arc/rules
cp -f ./Rules.make arc/rules/Rules.ggu
cp -f femcheck/rules/Rules.dist ./Rules.make
rules_ggu_restore:
cp -f arc/rules/Rules.ggu ./Rules.make
rules_nemunas:
cp -f arc/rules/Rules.nemunas ./Rules.make
rules_lagoon:
cp -f arc/rules/Rules.lagoon ./Rules.make
rules_carbonium:
cp -f arc/rules/Rules.carbonium ./Rules.make
nemon:
fem3d/bin/nemunas_adjust.sh -nemunas
nemoff:
fem3d/bin/nemunas_adjust.sh -original
git_nemunas:
. fem3d/bin/nemunas-git.sh
check_server:
@femcheck/servers/check_server.sh -check $(FORTRAN_COMPILER)
show_server:
@femcheck/servers/check_server.sh -show $(FORTRAN_COMPILER)
#---------------------------------------------------------------
# special ggu
#---------------------------------------------------------------
nompi:
cd fem3d; make nompi
#---------------------------------------------------------------
# check if routines are executable
#---------------------------------------------------------------
check_compiler:
@femcheck/check_compiler.sh "$(CC) $(CINFOFLAGS)" \
"$(F77) $(FINFOFLAGS)"
test_executable:
@if [ ! -x fembin/make_executable.sh ]; then make make_executable; fi
make_executable:
@echo "making programs executable"
chmod +x fembin/*
fembin/make_executable.sh
#---------------------------------------------------------------
# compatibility checks
#---------------------------------------------------------------
checkv: $(RULES_MAKE_COMPATIBILITY) $(RULES_MAKE_PARAMETERS)
RULES_MAKE_OK:
RULES_MAKE_NOT_COMPATIBLE:
@echo "*** incompatible version of Rules.make file"
@echo "provided: $(RULES_MAKE_VERSION)"
@echo "expected: $(RULES_MAKE_EXPECTED)"
@echo "please adapt your Rules.make file to the latest version"
@exit 1
RULES_MAKE_PARAMETER_ERROR:
@echo "*** incompatible parameters in Rules.make file"
@echo "$(RULES_MAKE_MESSAGE)"
@echo "please adapt your Rules.make file"
@exit 1
#---------------------------------------------------------------
# end of Makefile
#---------------------------------------------------------------