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Commits on Nov 23, 2021

• Merge pull request #7 from KUL-Radneuron/dev

  Show description for 8ec6cee
  Rad-dude

  authored
  8ec6cee

• placed KUL_synth_pats and KUL_cook_temp in root KUL_VBG dir

  Rad-dude

  committed
  e85304d

• Fixed minor bugs in failure check of hd-bet output, and removed -x from initial antsReg affine resgitration

  Rad-dude

  committed
  9e475a4

Commits on Nov 16, 2021

• Merge pull request #6 from treanus/dev

  Show description for 9aeff3b
  KUL-Radneuron

  authored
  9aeff3b

• fixed cuda check. nvidia-smi vram insteadof nvcc

  treanus

  committed
  e542d30

Commits on Nov 12, 2021

• Updated readme with example and brief mention of additional scripts

  Rad-dude

  committed
  2096af1

• updated Readme.md and added figs and pdf version

  Rad-dude

  committed
  16485a9

Commits on Nov 11, 2021

• Merge pull request #5 from treanus/dev

  Show description for 27443a9
  treanus

  authored
  27443a9

• update readme

  treanus

  committed
  caf4cb4

• update readme

  treanus

  committed
  c7a9f85

• update readme

  treanus

  committed
  39952c3

• add figures to readme

  treanus

  committed
  10040eb

• Merge branch 'dev' of https://github.com/treanus/KUL_VBG into dev

  treanus

  committed
  6851c21

• adding comments for radwan to solve

  treanus

  committed
  1f9beb4

• update readme in dev

  treanus

  committed
  38ed17c

Commits on Oct 28, 2021

• fixed minor bug lines 2368 - 2374

  Rad-dude

  committed
  ceb9896

Commits on Oct 13, 2021

• added check for nvram and automated determination of batch size for FaSu

  Rad-dude

  committed
  352f254

• Merge pull request #4 from treanus/dev

  Show description for c7dcc3b
  KUL-Radneuron

  authored
  c7dcc3b

• Search, test & set the freesurfer license at start

  treanus

  committed
  a2647a7

• Fastsurfer: use less memory & ignore fs version

  treanus

  committed
  389b99e

• update

  treanus

  committed
  473e711

Commits on Sep 11, 2021

• updated KUL_synth_pats by adding fs recon-all -autorecon1 initially, updated test data

  Rad-dude

  committed
  ed8d63f

Commits on Aug 20, 2021

• Fixed minor bug in nat_filled_mask.nii.gz, updated readme

  Rad-dude

  committed
  e44e37a

Commits on Aug 18, 2021

• Added hd-bet cpu mode if first attempt fails, fixed errors in KUL_synth_pats_4VBG.sh script

  Rad-dude

  committed
  a3cd1a6

Commits on Aug 10, 2021

• Added hd-bet gpu if nvc is found, switched to accurate mode hd-bet, added pure FS parcellation stream

  Rad-dude

  committed
  e4a7e67

Commits on Jul 28, 2021

• VBG -> fixed FS output dir, synth_paths -> added CUDA search loop and CPU mode for HD-BET

  Rad-dude

  committed
  dc6edb1

Commits on Jul 15, 2021

• fixed bug in FS_lic for -P 2

  Rad-dude

  committed
  6688ecc

• added FS_lic finder loop to -P 2 wf

  Rad-dude

  committed
  eabf782

Commits on Jul 5, 2021

• Fixed FaSu output dir bug in -P 1

  

  Ahmed Radwan

  committed
  e263a79

Commits on Jul 4, 2021

• Allowed FS Lic names are now .license and license.txt, searched 4 in FS_home, fixed bug in FaSu output dirs

  

  Ahmed Radwan

  committed
  a611067

Commits on Jun 28, 2021

• fixed bug when trying to find FaSu output aparc+aseg.mgz line 2882

  

  Ahmed Radwan

  committed
  cf5bb3e

Commits on May 19, 2021

• Modified FS parcellation workflow to use FastSurfer generated surf and label folders and continue with -make all

  Rad-dude

  committed
  e012307

Commits on May 14, 2021

• fixed R and L masks finding error

  Rad-dude

  committed
  f33677b

Commits on May 13, 2021

• minor debugging and cleaning

  Rad-dude

  committed
  d46d08b

Commits on May 12, 2021

• updated version and readme file with latest changes

  Rad-dude

  committed
  72bba99

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