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    11 repositories

    • bioconda-recipes

      Public
      Conda recipes for the bioconda channel.
      Shell
      •
      MIT License
      •3.2k•0•0•0•Updated Oct 8, 2024Oct 8, 2024

    • pggb

      Public
      the pangenome graph builder
      Shell
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      MIT License
      •40•0•0•0•Updated Jan 23, 2023Jan 23, 2023

    • updateSqueue

      Public
      Update the Slurm squeue queue
      Shell
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      GNU General Public License v2.0
      •0•0•0•0•Updated Jul 13, 2022Jul 13, 2022

    • lookkool

      Public
      Python package with c source for use in python workshop
      Shell
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      Other
      •0•0•0•0•Updated Aug 12, 2019Aug 12, 2019

    • ifxupdate

      Public
      BLAST db updates
      Shell
      •0•0•0•0•Updated Apr 19, 2019Apr 19, 2019

    • specifytrees

      Public
      Tree calculation thing
      Shell
      •0•0•0•0•Updated Sep 20, 2018Sep 20, 2018

    • helmod-cli

      Public
      A HeLmod command line tool
      Shell
      •0•0•0•0•Updated Oct 19, 2017Oct 19, 2017

    • gubbins

      Public
      Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
      Shell
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      GNU General Public License v2.0
      •50•0•0•0•Updated Apr 12, 2016Apr 12, 2016

    • chevrier_lightsheet_processing

      Public
      ImageJ plug-ins for lightsheet microscope processing for Nicolas Chevrier
      Shell
      •0•0•0•0•Updated Feb 20, 2015Feb 20, 2015

    • imagej_processing

      Public
      Demo files for ImageJ (headless) macro processing and SLURM scripts for Office Hours/Tips at 12
      Shell
      •1•2•0•0•Updated Feb 18, 2015Feb 18, 2015

    • pipeline

      Public
      A modular, file-based analysis pipeline for NGS data
      Shell
      •0•0•0•0•Updated Mar 21, 2014Mar 21, 2014