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  1. SVclone SVclone Public

    A computational method for inferring the cancer cell fraction of tumour structural variation from whole-genome sequencing data.

    Python 40 10

  2. Oshlack/MINTIE Oshlack/MINTIE Public

    Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.

    Python 34 7

  3. WEHIGenomicsRnD/nanopore-transfer-automation WEHIGenomicsRnD/nanopore-transfer-automation Public

    Performs archiving and transfer of Nanopore sequencing data

    Python 3 1

  4. WEHIGenomicsRnD/nanopore-demux-count WEHIGenomicsRnD/nanopore-demux-count Public

    Demultiplex reads and count sequences of interest from Nanopore data

    Nextflow

  5. Oshlack/ec-dtu-pipe Oshlack/ec-dtu-pipe Public

    Pipeline for performing differential transcript usage analysis using equivalence classes, transcript quantifications and/or exon counts

    R 4 1

  6. labarchives-py labarchives-py Public

    A python wrapper for interacting with the LabArchives API.

    Python 7